RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 FAM131CQ96AQ9 280 aa16.16■□□□□ 0.18
HDAC7-224ENST00000488927 NAPGQ99747 312 aaPredicted RBP16.16■□□□□ 0.18
HDAC7-224ENST00000488927 PCED1AQ9H1Q7 454 aa16.16■□□□□ 0.18
HDAC7-224ENST00000488927 KDM4CQ9H3R0 1056 aa16.16■□□□□ 0.18
HDAC7-224ENST00000488927 HOMER3Q9NSC5 361 aa16.16■□□□□ 0.18
HDAC7-224ENST00000488927 SEPT10Q9P0V9 454 aa16.16■□□□□ 0.18
HDAC7-224ENST00000488927 DKK3Q9UBP4 350 aa16.16■□□□□ 0.18
HDAC7-224ENST00000488927 TTC7AQ9ULT0 858 aaPredicted RBP16.16■□□□□ 0.18
HDAC7-224ENST00000488927 SNX12Q9UMY4 172 aa16.16■□□□□ 0.18
HDAC7-224ENST00000488927 ATP8A1Q9Y2Q0 1164 aa16.16■□□□□ 0.18
HDAC7-224ENST00000488927 BCLAF3A2AJT9 711 aaKnown RBP16.15■□□□□ 0.18
HDAC7-224ENST00000488927 CTAGE9A4FU28 777 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 CFAP69A5D8W1 941 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 HRO43593 1189 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 SOCS5O75159 536 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 NDUFS2O75306 463 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 RHOBTB1O94844 696 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 UGT2B4P06133 528 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 PRLRP16471 622 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 CA4P22748 312 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 CXCR5P32302 372 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 DRD3P35462 400 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 RGRP47804 291 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 SUOXP51687 545 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 NEK3P51956 506 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 ZBTB17Q13105 803 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 SIM2Q14190 667 aaPredicted RBP16.15■□□□□ 0.18
HDAC7-224ENST00000488927 ELF2Q15723 593 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 LONRF2Q1L5Z9 754 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 NCEH1Q6PIU2 408 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 BRAT1Q6PJG6 821 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 ERN2Q76MJ5 926 aaKnown RBP16.15■□□□□ 0.18
HDAC7-224ENST00000488927 PGBD5Q8N414 524 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 RASGEF1CQ8N431 466 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 AADATQ8N5Z0 425 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 LRRN4Q8WUT4 740 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 RLN3Q8WXF3 142 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 RAB7BQ96AH8 199 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 TOE1Q96GM8 510 aaKnown RBP16.15■□□□□ 0.18
HDAC7-224ENST00000488927 OSBPL9Q96SU4 736 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 EPC1Q9H2F5 836 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 SUV39H2Q9H5I1 410 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 WSB2Q9NYS7 404 aaPredicted RBP16.15■□□□□ 0.18
HDAC7-224ENST00000488927 TRHDEQ9UKU6 1024 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 RAB23Q9ULC3 237 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 TPX2Q9ULW0 747 aaKnown RBP16.15■□□□□ 0.18
HDAC7-224ENST00000488927 TTLL3Q9Y4R7 772 aa16.15■□□□□ 0.18
HDAC7-224ENST00000488927 TCRBV7S2A1N4TA0A589 114 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 LRRC72A6NJI9 287 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 HLA-DQB2P05538 268 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 SERPINF2P08697 491 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 NFKBIAP25963 317 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 PTPN3P26045 913 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 RBL1P28749 1068 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 GKP32189 559 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 NBL1P41271 181 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 MAXP61244 160 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 POLR2LP62875 67 aaKnown RBP16.14■□□□□ 0.17
HDAC7-224ENST00000488927 CNTN1Q12860 1018 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 PAPD7Q5XG87 772 aaKnown RBP16.14■□□□□ 0.17
HDAC7-224ENST00000488927 FBXL19Q6PCT2 694 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.14■□□□□ 0.17
HDAC7-224ENST00000488927 LPCAT2Q7L5N7 544 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 CADM4Q8NFZ8 388 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 SLC35B2Q8TB61 432 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 SPOCK2Q92563 424 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 FOXJ1Q92949 421 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 ARRDC3Q96B67 414 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 ZNF419Q96HQ0 510 aaPredicted RBP16.14■□□□□ 0.17
HDAC7-224ENST00000488927 ZC3H10Q96K80 434 aaKnown RBP16.14■□□□□ 0.17
HDAC7-224ENST00000488927 TEKT5Q96M29 485 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 KLHL32Q96NJ5 620 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 AGAP3Q96P47 875 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 WDR24Q96S15 920 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 SEMA3CQ99985 751 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 NEUROG2Q9H2A3 272 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 NOD2Q9HC29 1040 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 KLHL8Q9P2G9 620 aaPredicted RBP16.14■□□□□ 0.17
HDAC7-224ENST00000488927 R4GN57 208 aa16.14■□□□□ 0.17
HDAC7-224ENST00000488927 TSPAN11A1L157 253 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 C16orf96A6NNT2 1141 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 RNF103O00237 685 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 PGRMC1O00264 195 aaKnown RBP16.13■□□□□ 0.17
HDAC7-224ENST00000488927 SEMA4FO95754 770 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 ADRB3P13945 408 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 STIP1P31948 543 aaKnown RBP16.13■□□□□ 0.17
HDAC7-224ENST00000488927 ETF1P62495 437 aaKnown RBP16.13■□□□□ 0.17
HDAC7-224ENST00000488927 RPL6Q02878 288 aaKnown RBP16.13■□□□□ 0.17
HDAC7-224ENST00000488927 WASHC5Q12768 1159 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 SLC14A2Q15849 920 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 CCNG2Q16589 344 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 POM121L1PQ3SYA9 428 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 AGBL4Q5VU57 503 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 ITPRIPL1Q6GPH6 555 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 DRICH1Q6PGQ1 229 aaPredicted RBP16.13■□□□□ 0.17
HDAC7-224ENST00000488927 FAM124AQ86V42 546 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 ZSCAN30Q86W11 494 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 CAMK1DQ8IU85 385 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 FAM160A2Q8N612 972 aaPredicted RBP16.13■□□□□ 0.17
HDAC7-224ENST00000488927 PAF1Q8N7H5 531 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms