RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 ALG6Q9Y672 507 aa13.07□□□□□ -0.32
PHF1-210ENST00000488767 NYNRINQ9P2P1 1898 aaKnown RBP13.07□□□□□ -0.32
PHF1-210ENST00000488767 GOLGA6L3A6NEY3 463 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 C16orf96A6NNT2 1141 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 APOL1O14791 398 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 PJA2O43164 708 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 GDF9O60383 454 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 OPHN1O60890 802 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 RNGTTO60942 597 aaKnown RBP13.06□□□□□ -0.32
PHF1-210ENST00000488767 CER1O95813 267 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 IGHV4-34P06331 123 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 GRIA4P48058 902 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 CSNK1DP48730 415 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 SUOXP51687 545 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 ARSEP51690 589 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 AP1S1P61966 158 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 NSUN2Q08J23 767 aaKnown RBP eCLIP13.06□□□□□ -0.32
PHF1-210ENST00000488767 TFDP2Q14188 446 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 PAFAH1B3Q15102 231 aaKnown RBP13.06□□□□□ -0.32
PHF1-210ENST00000488767 CYTH1Q15438 398 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 PIP5KL1Q5T9C9 394 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 NCBP2-AS2Q69YL0 99 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 KIAA1161Q6NSJ0 714 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 ERAP2Q6P179 960 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 RAD9BQ6WBX8 426 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 BZW1Q7L1Q6 419 aaKnown RBP13.06□□□□□ -0.32
PHF1-210ENST00000488767 PARS2Q7L3T8 475 aaKnown RBP13.06□□□□□ -0.32
PHF1-210ENST00000488767 TTC7BQ86TV6 843 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 RFX6Q8HWS3 928 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 CCNYQ8ND76 341 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 PCDH19Q8TAB3 1148 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 HCAR2Q8TDS4 363 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 FAF2Q96CS3 445 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 RBM41Q96IZ5 413 aaKnown RBP13.06□□□□□ -0.32
PHF1-210ENST00000488767 FEM1CQ96JP0 617 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 SERAC1Q96JX3 654 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 ZNF641Q96N77 438 aaPredicted RBP13.06□□□□□ -0.32
PHF1-210ENST00000488767 KLHL32Q96NJ5 620 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 RNF157Q96PX1 679 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 PSKH2Q96QS6 385 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 GRPEL1Q9HAV7 217 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 CAPN10Q9HC96 672 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 TM9SF3Q9HD45 589 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 LHX3Q9UBR4 397 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 RALGAPA1Q6GYQ0 2036 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 CFAP54Q96N23 3096 aa13.06□□□□□ -0.32
PHF1-210ENST00000488767 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.05□□□□□ -0.32
PHF1-210ENST00000488767 PRAMEF26H0Y7S4 382 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 SLC30A4O14863 429 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 TSPAN6O43657 245 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 AP1G1O43747 822 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 MFSD11O43934 449 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 MAFKO60675 156 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 MAGEC1O60732 1142 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 IL4RP24394 825 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 MAT2AP31153 395 aaKnown RBP13.05□□□□□ -0.32
PHF1-210ENST00000488767 GKP32189 559 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 CETN2P41208 172 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 GARSP41250 739 aaKnown RBP13.05□□□□□ -0.32
PHF1-210ENST00000488767 MMP13P45452 471 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 SCNN1BP51168 640 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 POLR2LP62875 67 aaKnown RBP13.05□□□□□ -0.32
PHF1-210ENST00000488767 RPS21P63220 83 aaKnown RBP13.05□□□□□ -0.32
PHF1-210ENST00000488767 BCL2L1Q07817 233 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 ELP6Q0PNE2 266 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 GALNT2Q10471 571 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 SGCGQ13326 291 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 STAT4Q14765 748 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 UAP1L1Q3KQV9 507 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 NAPEPLDQ6IQ20 393 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 BRAT1Q6PJG6 821 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 ARHGAP36Q6ZRI8 547 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 SRLQ86TD4 932 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 HORMAD1Q86X24 394 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 CPNE8Q86YQ8 564 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 CCDC50Q8IVM0 306 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 SYCE1Q8N0S2 351 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 NETO2Q8NC67 525 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 TSEN2Q8NCE0 465 aaKnown RBP13.05□□□□□ -0.32
PHF1-210ENST00000488767 KIAA1524Q8TCG1 905 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 RAPGEF5Q92565 580 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 RNF25Q96BH1 459 aaPredicted RBP13.05□□□□□ -0.32
PHF1-210ENST00000488767 C1QTNF7Q9BXJ2 289 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 TSGA10Q9BZW7 698 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 DKK3Q9UBP4 350 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 HYOU1Q9Y4L1 999 aa13.05□□□□□ -0.32
PHF1-210ENST00000488767 A0A1W2PQ67 120 aa13.04□□□□□ -0.32
PHF1-210ENST00000488767 A0A1W2PQU0 124 aa13.04□□□□□ -0.32
PHF1-210ENST00000488767 C4orf47A7E2U8 309 aa13.04□□□□□ -0.32
PHF1-210ENST00000488767 PPP1R12AO14974 1030 aaPredicted RBP13.04□□□□□ -0.32
PHF1-210ENST00000488767 LATO43561 262 aa13.04□□□□□ -0.32
PHF1-210ENST00000488767 DFNA5O60443 496 aa13.04□□□□□ -0.32
PHF1-210ENST00000488767 ZRANB2O95218 330 aaKnown RBP eCLIP13.04□□□□□ -0.32
PHF1-210ENST00000488767 KRT10P13645 584 aa13.04□□□□□ -0.32
PHF1-210ENST00000488767 CA4P22748 312 aa13.04□□□□□ -0.32
PHF1-210ENST00000488767 CCNCP24863 283 aa13.04□□□□□ -0.32
PHF1-210ENST00000488767 CD38P28907 300 aa13.04□□□□□ -0.32
PHF1-210ENST00000488767 AKT2P31751 481 aa13.04□□□□□ -0.32
PHF1-210ENST00000488767 CSNK1EP49674 416 aaKnown RBP13.04□□□□□ -0.32
PHF1-210ENST00000488767 PPP2CBP62714 309 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms