RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CD160O95971 181 aa19.67■□□□□ 0.74
CCM2-216ENST00000488727 ABHD2P08910 425 aa19.67■□□□□ 0.74
CCM2-216ENST00000488727 WASP42768 502 aa19.67■□□□□ 0.74
CCM2-216ENST00000488727 CORO7P57737 925 aa19.67■□□□□ 0.74
CCM2-216ENST00000488727 ENPP2Q13822 863 aa19.67■□□□□ 0.74
CCM2-216ENST00000488727 P3H1Q32P28 736 aa19.67■□□□□ 0.74
CCM2-216ENST00000488727 NPNTQ6UXI9 565 aa19.67■□□□□ 0.74
CCM2-216ENST00000488727 ZNF354CQ86Y25 554 aa19.67■□□□□ 0.74
CCM2-216ENST00000488727 CHPFQ8IZ52 775 aa19.67■□□□□ 0.74
CCM2-216ENST00000488727 TXNDC5Q8NBS9 432 aaKnown RBP19.67■□□□□ 0.74
CCM2-216ENST00000488727 RABEP2Q9H5N1 569 aa19.67■□□□□ 0.74
CCM2-216ENST00000488727 DTLQ9NZJ0 730 aa19.67■□□□□ 0.74
CCM2-216ENST00000488727 SAE1Q9UBE0 346 aaPredicted RBP19.67■□□□□ 0.74
CCM2-216ENST00000488727 PLA2G4CQ9UP65 541 aa19.67■□□□□ 0.74
CCM2-216ENST00000488727 KMT2EQ8IZD2 1858 aa19.67■□□□□ 0.74
CCM2-216ENST00000488727 CKAP5Q14008 2032 aa19.66■□□□□ 0.74
CCM2-216ENST00000488727 C5orf60A6NFR6 353 aa19.66■□□□□ 0.74
CCM2-216ENST00000488727 J3KR12 359 aa19.66■□□□□ 0.74
CCM2-216ENST00000488727 SGK1O00141 431 aa19.66■□□□□ 0.74
CCM2-216ENST00000488727 MYO1CO00159 1063 aa19.66■□□□□ 0.74
CCM2-216ENST00000488727 ACSL3O95573 720 aa19.66■□□□□ 0.74
CCM2-216ENST00000488727 ATP5DP30049 168 aa19.66■□□□□ 0.74
CCM2-216ENST00000488727 SEC24CP53992 1094 aa19.66■□□□□ 0.74
CCM2-216ENST00000488727 IFI35P80217 286 aaPredicted RBP19.66■□□□□ 0.74
CCM2-216ENST00000488727 TFDP2Q14188 446 aa19.66■□□□□ 0.74
CCM2-216ENST00000488727 SKIDA1Q1XH10 827 aa19.66■□□□□ 0.74
CCM2-216ENST00000488727 TAOK1Q7L7X3 1001 aa19.66■□□□□ 0.74
CCM2-216ENST00000488727 UHMK1Q8TAS1 419 aaKnown RBP19.66■□□□□ 0.74
CCM2-216ENST00000488727 TMEM245Q9H330 911 aa19.66■□□□□ 0.74
CCM2-216ENST00000488727 PRDM16Q9HAZ2 1276 aa19.66■□□□□ 0.74
CCM2-216ENST00000488727 PPANQ9NQ55 473 aaKnown RBP19.66■□□□□ 0.74
CCM2-216ENST00000488727 HS3ST2Q9Y278 367 aa19.66■□□□□ 0.74
CCM2-216ENST00000488727 HEY1Q9Y5J3 304 aa19.66■□□□□ 0.74
CCM2-216ENST00000488727 STON1Q9Y6Q2 735 aa19.66■□□□□ 0.74
CCM2-216ENST00000488727 CHURC1-FNTBB4DL54 471 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 K7ERQ8 282 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 SRPRAP08240 638 aaKnown RBP19.65■□□□□ 0.74
CCM2-216ENST00000488727 HLA-EP13747 358 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 PECAM1P16284 738 aaPredicted RBP19.65■□□□□ 0.74
CCM2-216ENST00000488727 ZFXP17010 805 aaPredicted RBP19.65■□□□□ 0.74
CCM2-216ENST00000488727 PRKCHP24723 683 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 MTAPQ13126 283 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 MORF4L2Q15014 288 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 FNDC3BQ53EP0 1204 aaKnown RBP19.65■□□□□ 0.74
CCM2-216ENST00000488727 ZNF366Q8N895 744 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 PDFQ9HBH1 243 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 LGALS13Q9UHV8 139 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 SLC25A13Q9UJS0 675 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 TPX2Q9ULW0 747 aaKnown RBP19.65■□□□□ 0.74
CCM2-216ENST00000488727 SMIM23A6NLE4 172 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 PRAMEF11O60813 436 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 GPR37L1O60883 481 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 SRCP12931 536 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 NTSR1P30989 418 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 GALNT2Q10471 571 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 KYNUQ16719 465 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 RETSATQ6NUM9 610 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 SERPINA13PQ6UXR4 307 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 MICALCLQ6ZW33 695 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 GLIS1Q8NBF1 620 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 LRRN4Q8WUT4 740 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 HAUS1Q96CS2 278 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 GABRG3Q99928 467 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 PHACTR1Q9C0D0 580 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 MTG2Q9H4K7 406 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 CCDC134Q9H6E4 229 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 IPO11Q9UI26 975 aaKnown RBP19.65■□□□□ 0.74
CCM2-216ENST00000488727 MMP17Q9ULZ9 603 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 SHOC2Q9UQ13 582 aa19.65■□□□□ 0.74
CCM2-216ENST00000488727 TTC34A8MYJ7 566 aa19.64■□□□□ 0.73
CCM2-216ENST00000488727 NPC1O15118 1278 aa19.64■□□□□ 0.73
CCM2-216ENST00000488727 SMAD6O43541 496 aaKnown RBP19.64■□□□□ 0.73
CCM2-216ENST00000488727 MAFKO60675 156 aa19.64■□□□□ 0.73
CCM2-216ENST00000488727 CHN1P15882 459 aa19.64■□□□□ 0.73
CCM2-216ENST00000488727 TGM2P21980 687 aa19.64■□□□□ 0.73
CCM2-216ENST00000488727 GARSP41250 739 aaKnown RBP19.64■□□□□ 0.73
CCM2-216ENST00000488727 SERPINH1P50454 418 aaKnown RBP19.64■□□□□ 0.73
CCM2-216ENST00000488727 STAT4Q14765 748 aa19.64■□□□□ 0.73
CCM2-216ENST00000488727 HSF5Q4G112 596 aaPredicted RBP19.64■□□□□ 0.73
CCM2-216ENST00000488727 SPEM1Q8N4L4 309 aa19.64■□□□□ 0.73
CCM2-216ENST00000488727 ATPAF2Q8N5M1 289 aa19.64■□□□□ 0.73
CCM2-216ENST00000488727 KDM1BQ8NB78 822 aa19.64■□□□□ 0.73
CCM2-216ENST00000488727 TTC25Q96NG3 672 aa19.64■□□□□ 0.73
CCM2-216ENST00000488727 OLFM3Q96PB7 478 aa19.64■□□□□ 0.73
CCM2-216ENST00000488727 RAD54BQ9Y620 910 aa19.64■□□□□ 0.73
CCM2-216ENST00000488727 FAM169AQ9Y6X4 670 aa19.64■□□□□ 0.73
CCM2-216ENST00000488727 PRR33A8MZF0 331 aa19.63■□□□□ 0.73
CCM2-216ENST00000488727 DLL1O00548 723 aa19.63■□□□□ 0.73
CCM2-216ENST00000488727 MAGEA9P43362 315 aa19.63■□□□□ 0.73
CCM2-216ENST00000488727 SLCO1A2P46721 670 aa19.63■□□□□ 0.73
CCM2-216ENST00000488727 VASPP50552 380 aaPredicted RBP19.63■□□□□ 0.73
CCM2-216ENST00000488727 ST8SIA6P61647 398 aa19.63■□□□□ 0.73
CCM2-216ENST00000488727 OTUD4Q01804 1114 aaKnown RBP19.63■□□□□ 0.73
CCM2-216ENST00000488727 LONRF1Q17RB8 773 aa19.63■□□□□ 0.73
CCM2-216ENST00000488727 RNASEH2BQ5TBB1 312 aaKnown RBP19.63■□□□□ 0.73
CCM2-216ENST00000488727 TRMT11Q7Z4G4 463 aaKnown RBP19.63■□□□□ 0.73
CCM2-216ENST00000488727 PCGF5Q86SE9 256 aa19.63■□□□□ 0.73
CCM2-216ENST00000488727 PRUNE1Q86TP1 453 aa19.63■□□□□ 0.73
CCM2-216ENST00000488727 ATP11CQ8NB49 1132 aa19.63■□□□□ 0.73
CCM2-216ENST00000488727 FRS2Q8WU20 508 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms