RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 ACADMP11310 421 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 VAV1P15498 845 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 VARSP26640 1264 aaKnown RBP10.44□□□□□ -0.74
SKA1-204ENST00000488454 RBL1P28749 1068 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 ACTN2P35609 894 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 MAPK8P45983 427 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 SCNN1BP51168 640 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 IFI35P80217 286 aaPredicted RBP10.44□□□□□ -0.74
SKA1-204ENST00000488454 LMNB2Q03252 620 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 TUBB2AQ13885 445 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 GRM3Q14832 879 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 MYLK3Q32MK0 819 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 TEX44Q53QW1 395 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 FAM46CQ5VWP2 391 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 KIAA1211LQ6NV74 962 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 DPY19L3Q6ZPD9 716 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 GSTA5Q7RTV2 222 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 PID1Q7Z2X4 250 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 TMPRSS6Q8IU80 811 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 CREG2Q8IUH2 290 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 C1orf210Q8IVY1 113 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 STK40Q8N2I9 435 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 CAMKK1Q8N5S9 505 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 PAF1Q8N7H5 531 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 OR2A12Q8NGT7 310 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 SLC35B2Q8TB61 432 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 ATG4AQ8WYN0 398 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 PRCCQ92733 491 aaPredicted RBP10.44□□□□□ -0.74
SKA1-204ENST00000488454 MAGOHBQ96A72 148 aaKnown RBP10.44□□□□□ -0.74
SKA1-204ENST00000488454 AGAP3Q96P47 875 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 HEPHQ9BQS7 1158 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 TUBB2BQ9BVA1 445 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 AP1M1Q9BXS5 423 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 POLR1EQ9GZS1 481 aaKnown RBP10.44□□□□□ -0.74
SKA1-204ENST00000488454 MTG2Q9H4K7 406 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 DYRK4Q9NR20 520 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 KLHL8Q9P2G9 620 aaPredicted RBP10.44□□□□□ -0.74
SKA1-204ENST00000488454 IL36AQ9UHA7 158 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 FEZ2Q9UHY8 353 aaPredicted RBP10.44□□□□□ -0.74
SKA1-204ENST00000488454 TRHDEQ9UKU6 1024 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 DNPEPQ9ULA0 475 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 DRG1Q9Y295 367 aaKnown RBP10.44□□□□□ -0.74
SKA1-204ENST00000488454 DOCK4Q8N1I0 1966 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 COL4A3Q01955 1670 aa10.44□□□□□ -0.74
SKA1-204ENST00000488454 TTC28Q96AY4 2481 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 ESPNB1AK53 854 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 RNF103O00237 685 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 ZNF821O75541 412 aaPredicted RBP10.43□□□□□ -0.74
SKA1-204ENST00000488454 AVPP01185 164 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 IL1BP01584 269 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 DNTTP04053 509 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 CHRNA3P32297 505 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 CSNK1DP48730 415 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 CCNHP51946 323 aaPredicted RBP10.43□□□□□ -0.74
SKA1-204ENST00000488454 SATB1Q01826 763 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 CCDC15Q0P6D6 951 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 NR6A1Q15406 480 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 TMEM259Q4ZIN3 620 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 RALGPS1Q5JS13 557 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 DNTTIP2Q5QJE6 756 aaKnown RBP10.43□□□□□ -0.74
SKA1-204ENST00000488454 CFAP58Q5T655 872 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 ATXN7L2Q5T6C5 722 aaPredicted RBP10.43□□□□□ -0.74
SKA1-204ENST00000488454 ZNF776Q68DI1 518 aaPredicted RBP10.43□□□□□ -0.74
SKA1-204ENST00000488454 ANO7Q6IWH7 933 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 DRICH1Q6PGQ1 229 aaPredicted RBP10.43□□□□□ -0.74
SKA1-204ENST00000488454 KIAA1324Q6UXG2 1013 aaKnown RBP10.43□□□□□ -0.74
SKA1-204ENST00000488454 SRLQ86TD4 932 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 MMAAQ8IVH4 418 aaKnown RBP10.43□□□□□ -0.74
SKA1-204ENST00000488454 CCDC89Q8N998 374 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 FAM71DQ8N9W8 422 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 TMIEQ8NEW7 156 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 ATL2Q8NHH9 583 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 GANCQ8TET4 914 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 HMGB4Q8WW32 186 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 NKD2Q969F2 451 aaPredicted RBP10.43□□□□□ -0.74
SKA1-204ENST00000488454 SIPA1Q96FS4 1042 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 LRIG1Q96JA1 1093 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 EXOC2Q96KP1 924 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 HHIPQ96QV1 700 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 NUDCD1Q96RS6 583 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 FAM129BQ96TA1 746 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 IL12RB2Q99665 862 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 MGME1Q9BQP7 344 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 TMEM121Q9BTD3 319 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 ZDHHC6Q9H6R6 413 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 C10orf88Q9H8K7 445 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 POLR3BQ9NW08 1133 aaPredicted RBP10.43□□□□□ -0.74
SKA1-204ENST00000488454 LHX3Q9UBR4 397 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 EVLQ9UI08 416 aaPredicted RBP10.43□□□□□ -0.74
SKA1-204ENST00000488454 SCML1Q9UN30 329 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 NCKAP1Q9Y2A7 1128 aa10.43□□□□□ -0.74
SKA1-204ENST00000488454 TECTAO75443 2155 aa10.42□□□□□ -0.74
SKA1-204ENST00000488454 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.42□□□□□ -0.74
SKA1-204ENST00000488454 C5orf60A6NFR6 353 aa10.42□□□□□ -0.74
SKA1-204ENST00000488454 INSIG1O15503 277 aa10.42□□□□□ -0.74
SKA1-204ENST00000488454 PAPSS2O95340 614 aaPredicted RBP10.42□□□□□ -0.74
SKA1-204ENST00000488454 IFNB1P01574 187 aa10.42□□□□□ -0.74
SKA1-204ENST00000488454 ITGAVP06756 1048 aa10.42□□□□□ -0.74
SKA1-204ENST00000488454 C5AR1P21730 350 aa10.42□□□□□ -0.74
SKA1-204ENST00000488454 CA4P22748 312 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms