RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 KIAA1586Q9HCI6 787 aa5.37□□□□□ -1.55
R3HDM1-218ENST00000487294 PDE11AQ9HCR9 933 aa5.37□□□□□ -1.55
R3HDM1-218ENST00000487294 SPHK2Q9NRA0 654 aa5.37□□□□□ -1.55
R3HDM1-218ENST00000487294 TMEM30AQ9NV96 361 aa5.37□□□□□ -1.55
R3HDM1-218ENST00000487294 CALCOCO1Q9P1Z2 691 aa5.37□□□□□ -1.55
R3HDM1-218ENST00000487294 BCCIPQ9P287 314 aaKnown RBP eCLIP5.37□□□□□ -1.55
R3HDM1-218ENST00000487294 CFAP97Q9P2B7 532 aa5.37□□□□□ -1.55
R3HDM1-218ENST00000487294 DEC1Q9P2X7 70 aa5.37□□□□□ -1.55
R3HDM1-218ENST00000487294 FBXO10Q9UK96 956 aa5.37□□□□□ -1.55
R3HDM1-218ENST00000487294 ADAM29Q9UKF5 820 aa5.37□□□□□ -1.55
R3HDM1-218ENST00000487294 APOBEC2Q9Y235 224 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-218ENST00000487294 ZDHHC9Q9Y397 364 aa5.37□□□□□ -1.55
R3HDM1-218ENST00000487294 NME7Q9Y5B8 376 aa5.37□□□□□ -1.55
R3HDM1-218ENST00000487294 PCDHGB2Q9Y5G2 931 aa5.37□□□□□ -1.55
R3HDM1-218ENST00000487294 PTPRJQ12913 1337 aa5.37□□□□□ -1.55
R3HDM1-218ENST00000487294 KNTC1P50748 2209 aa5.37□□□□□ -1.55
R3HDM1-218ENST00000487294 MAST4O15021 2626 aa5.37□□□□□ -1.55
R3HDM1-218ENST00000487294 CABIN1Q9Y6J0 2220 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 KNL1Q8NG31 2342 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 A0A1B0GTW7 788 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 ESYT3A0FGR9 886 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 TBC1D3BA6NDS4 549 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 ZNF233A6NK53 670 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 COCHO43405 550 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 KRT19P08727 400 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 TMEM191BP0C7N4 346 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 HOXB2P14652 356 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 GNSP15586 552 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 ACO1P21399 889 aaKnown RBP5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 YWHAQP27348 245 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 AOAHP28039 575 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 MC4RP32245 332 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 GNL1P36915 607 aaPredicted RBP5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 CASP5P51878 434 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 PSMC1P62191 440 aaKnown RBP5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 SNRPFP62306 86 aaKnown RBP5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 GRIK2Q13002 908 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 DHX8Q14562 1220 aaKnown RBP5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 COL28A1Q2UY09 1125 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 TMEM177Q53S58 311 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 WDR45BQ5MNZ6 344 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 HECTD3Q5T447 861 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 IL27RAQ6UWB1 636 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 TRAPPC11Q7Z392 1133 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 TMEM25Q86YD3 366 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 NAXDQ8IW45 347 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 BBS7Q8IWZ6 715 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 KBTBD2Q8IY47 623 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 TRIML1Q8N9V2 468 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 B3GALNT2Q8NCR0 500 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 LSM14AQ8ND56 463 aaKnown RBP5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 OR5B17Q8NGF7 314 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 TMEM174Q8WUU8 243 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 SAAL1Q96ER3 474 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 ANKRD36BP1Q96IX9 119 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 CBWD1Q9BRT8 395 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 SSBP3Q9BWW4 388 aaPredicted RBP5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 GTPBP2Q9BX10 602 aaKnown RBP5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 ZHX3Q9H4I2 956 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 BARX1Q9HBU1 254 aaPredicted RBP5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 CSNK1G1Q9HCP0 422 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 ITM2CQ9NQX7 267 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 SMPD4Q9NXE4 827 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 USP36Q9P275 1121 aaKnown RBP5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 WDR35Q9P2L0 1181 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 SLC27A6Q9Y2P4 619 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 ATXN2Q99700 1313 aaKnown RBP5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 ADAMTS9Q9P2N4 1935 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 PTPRBP23467 1997 aa5.36□□□□□ -1.55
R3HDM1-218ENST00000487294 SLC12A8A0AV02 714 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 PRRT4C9JH25 899 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 FLRT2O43155 660 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 PAPSS1O43252 624 aaPredicted RBP5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 DNAJC8O75937 253 aaPredicted RBP5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 GCNT3O95395 438 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 ASMTLO95671 621 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 TNNC2P02585 160 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 CISD3P0C7P0 127 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 MBL2P11226 248 aaPredicted RBP5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 CD6P30203 668 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 OXTRP30559 389 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 ATICP31939 592 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 HOXD13P35453 343 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 MECP2P51608 486 aaKnown RBP5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 CACNA2D1P54289 1103 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 KDSRQ06136 332 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 E2F5Q15329 346 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 PLEKHG6Q3KR16 790 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 MDH1BQ5I0G3 518 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 C10orf76Q5T2E6 689 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 EGFLAMQ63HQ2 1017 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 GRAMD4Q6IC98 578 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 SDE2Q6IQ49 451 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 CNNM4Q6P4Q7 775 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 PAQR9Q6ZVX9 377 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 USP49Q70CQ1 688 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 EPM2AIP1Q7L775 607 aaPredicted RBP5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 TTC30AQ86WT1 665 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 CHPFQ8IZ52 775 aa5.35□□□□□ -1.55
R3HDM1-218ENST00000487294 DLG3Q92796 817 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms