RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ADKP55263 362 aaKnown RBP19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 C1QBPQ07021 282 aaKnown RBP19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 PRRT3Q5FWE3 981 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 TRNP1Q6NT89 227 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 CCDC81Q6ZN84 652 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 BNIPLQ7Z465 357 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 XYLT1Q86Y38 959 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 PHACTR4Q8IZ21 702 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 RYBPQ8N488 228 aaPredicted RBP19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 TMEM35BQ8NCS4 154 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 GLMNQ92990 594 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 VOPP1Q96AW1 172 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 CCDC3Q9BQI4 270 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 CLMPQ9H6B4 373 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 TMEM51Q9NW97 253 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 GTF3C3Q9Y5Q9 886 aa19.76■□□□□ 0.75
SMPDL3A-202ENST00000487215 CCDC187A0A096LP49 1063 aa19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 LMO7DNF2Z398 122 aa19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 CDH5P33151 784 aaPredicted RBP19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 IGFALSP35858 605 aa19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 ACVRL1P37023 503 aa19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 THOP1P52888 689 aa19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 PTK2BQ14289 1009 aa19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 ZSCAN23Q3MJ62 389 aa19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 ZNF805Q5CZA5 627 aa19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 FAM131BQ86XD5 332 aa19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 PLPP6Q8IY26 295 aa19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 FAM71AQ8IYT1 594 aa19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 WDR48Q8TAF3 677 aa19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 ISG20Q96AZ6 181 aaKnown RBP19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 CENPTQ96BT3 561 aa19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 C18orf8Q96DM3 657 aa19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 TBATAQ96M53 351 aa19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 SYNDIG1Q9H7V2 258 aa19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 PPARGC1AQ9UBK2 798 aaKnown RBP19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 RWDD2AQ9UIY3 292 aa19.75■□□□□ 0.75
SMPDL3A-202ENST00000487215 SLC28A2O43868 658 aa19.74■□□□□ 0.75
SMPDL3A-202ENST00000487215 ANXA6P08133 673 aa19.74■□□□□ 0.75
SMPDL3A-202ENST00000487215 SPIDRQ14159 915 aa19.74■□□□□ 0.75
SMPDL3A-202ENST00000487215 C2CD6Q53TS8 623 aa19.74■□□□□ 0.75
SMPDL3A-202ENST00000487215 VPS36Q86VN1 386 aa19.74■□□□□ 0.75
SMPDL3A-202ENST00000487215 IRF2BP1Q8IU81 584 aa19.74■□□□□ 0.75
SMPDL3A-202ENST00000487215 CFAP57Q96MR6 1250 aa19.74■□□□□ 0.75
SMPDL3A-202ENST00000487215 SLC13A1Q9BZW2 595 aa19.74■□□□□ 0.75
SMPDL3A-202ENST00000487215 CLPBQ9H078 707 aa19.74■□□□□ 0.75
SMPDL3A-202ENST00000487215 PDCL3Q9H2J4 239 aa19.74■□□□□ 0.75
SMPDL3A-202ENST00000487215 NDFIP2Q9NV92 336 aa19.74■□□□□ 0.75
SMPDL3A-202ENST00000487215 PADI4Q9UM07 663 aa19.74■□□□□ 0.75
SMPDL3A-202ENST00000487215 CXorf51AA0A1B0GTR3 108 aa19.73■□□□□ 0.75
SMPDL3A-202ENST00000487215 GOLGA8SH3BPF8 625 aa19.73■□□□□ 0.75
SMPDL3A-202ENST00000487215 KRIT1O00522 736 aa19.73■□□□□ 0.75
SMPDL3A-202ENST00000487215 AREL1O15033 823 aa19.73■□□□□ 0.75
SMPDL3A-202ENST00000487215 YY2O15391 372 aa19.73■□□□□ 0.75
SMPDL3A-202ENST00000487215 UGT2B4P06133 528 aa19.73■□□□□ 0.75
SMPDL3A-202ENST00000487215 ITGA2BP08514 1039 aa19.73■□□□□ 0.75
SMPDL3A-202ENST00000487215 TSHRP16473 764 aa19.73■□□□□ 0.75
SMPDL3A-202ENST00000487215 MACC1Q6ZN28 852 aa19.73■□□□□ 0.75
SMPDL3A-202ENST00000487215 OR2AP1Q8NGE2 309 aa19.73■□□□□ 0.75
SMPDL3A-202ENST00000487215 ARHGEF2Q92974 986 aaKnown RBP19.73■□□□□ 0.75
SMPDL3A-202ENST00000487215 ARHGEF26Q96DR7 871 aa19.73■□□□□ 0.75
SMPDL3A-202ENST00000487215 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.73■□□□□ 0.75
SMPDL3A-202ENST00000487215 TMEM59LQ9UK28 342 aa19.73■□□□□ 0.75
SMPDL3A-202ENST00000487215 DOCK4Q8N1I0 1966 aa19.73■□□□□ 0.75
SMPDL3A-202ENST00000487215 MYO18BQ8IUG5 2567 aa19.73■□□□□ 0.75
SMPDL3A-202ENST00000487215 NTN3O00634 580 aaPredicted RBP19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 GSRP00390 522 aa19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 CELA2BP08218 269 aaPredicted RBP19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 CYP11B1P15538 503 aa19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 ETFBP38117 255 aa19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 BPIFB4P59827 614 aa19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 YPEL5P62699 121 aa19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 KCNC4Q03721 635 aa19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 POLD3Q15054 466 aaPredicted RBP19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 ARL13BQ3SXY8 428 aa19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 LRRC73Q5JTD7 316 aa19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 FAXCQ5TGI0 409 aa19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 ESRP1Q6NXG1 681 aaKnown RBP19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 LIN37Q96GY3 246 aaPredicted RBP19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 KLHL32Q96NJ5 620 aa19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 CCNL2Q96S94 520 aaPredicted RBP19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 OSBPL1AQ9BXW6 950 aa19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 MBNL1Q9NR56 388 aaKnown RBP19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 ATXN7L1Q9ULK2 861 aaPredicted RBP19.72■□□□□ 0.75
SMPDL3A-202ENST00000487215 EFSO43281 561 aa19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 MMP20O60882 483 aa19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 EIF4A3P38919 411 aaKnown RBP19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 MTIF2P46199 727 aaKnown RBP19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 GEMIN4P57678 1058 aaKnown RBP19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 SNRPD1P62314 119 aaKnown RBP19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 PPARDQ03181 441 aa19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 MYLK3Q32MK0 819 aa19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 RAB6CQ53S08 254 aa19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 MANEALQ5VSG8 457 aa19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 TAF3Q5VWG9 929 aa19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 DPY19L2P1Q6NXN4 242 aa19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 LEKR1Q6ZMV7 388 aa19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 B3GNT8Q7Z7M8 397 aa19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 NLRP14Q86W24 1093 aa19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 TP53I13Q8NBR0 393 aaPredicted RBP19.71■□□□□ 0.75
SMPDL3A-202ENST00000487215 RAB6CQ9H0N0 254 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms