RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 CASZ1Q86V15 1759 aa13.48□□□□□ -0.25
HDLBP-241ENST00000487169 MYBPHLA2RUH7 354 aa13.48□□□□□ -0.25
HDLBP-241ENST00000487169 CLDN11O75508 207 aa13.48□□□□□ -0.25
HDLBP-241ENST00000487169 NUDT17P0C025 328 aa13.48□□□□□ -0.25
HDLBP-241ENST00000487169 AIF1P55008 147 aa13.48□□□□□ -0.25
HDLBP-241ENST00000487169 GALNT3Q14435 633 aa13.48□□□□□ -0.25
HDLBP-241ENST00000487169 PLEKHM3Q6ZWE6 761 aa13.48□□□□□ -0.25
HDLBP-241ENST00000487169 APTXQ7Z2E3 356 aaKnown RBP13.48□□□□□ -0.25
HDLBP-241ENST00000487169 RNF145Q96MT1 663 aa13.48□□□□□ -0.25
HDLBP-241ENST00000487169 DMAC2Q9NW81 257 aa13.48□□□□□ -0.25
HDLBP-241ENST00000487169 KCNK4Q9NYG8 393 aa13.48□□□□□ -0.25
HDLBP-241ENST00000487169 LZTS1Q9Y250 596 aa13.48□□□□□ -0.25
HDLBP-241ENST00000487169 STXBP5LQ9Y2K9 1186 aa13.48□□□□□ -0.25
HDLBP-241ENST00000487169 PCDHA11Q9Y5I1 949 aa13.48□□□□□ -0.25
HDLBP-241ENST00000487169 SNTNA6NMZ2 147 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 TSHRP16473 764 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 NDUFV1P49821 464 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 PAGE2BQ5JRK9 111 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 NAIF1Q69YI7 327 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-241ENST00000487169 AFTPHQ6ULP2 937 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 UTP15Q8TED0 518 aaKnown RBP13.47□□□□□ -0.25
HDLBP-241ENST00000487169 BRI3BPQ8WY22 251 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 TFAP2BQ92481 460 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 UPF1Q92900 1129 aaKnown RBP eCLIP13.47□□□□□ -0.25
HDLBP-241ENST00000487169 SIKE1Q9BRV8 207 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 TBCDQ9BTW9 1192 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 TLE6Q9H808 572 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 ERVK-5Q9HDB9 667 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 SLCO1B3Q9NPD5 702 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 DDX28Q9NUL7 540 aaKnown RBP13.47□□□□□ -0.25
HDLBP-241ENST00000487169 XPR1Q9UBH6 696 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 C15orf38-AP3S2A0A0A6YYH1 394 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-241ENST00000487169 ATP6AP2A0A1C7CYW4 349 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 FFAR3O14843 346 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 GPR42O15529 346 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 ATP6AP2O75787 350 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 KRT20P35900 424 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 INTS6LQ5JSJ4 861 aaKnown RBP13.47□□□□□ -0.25
HDLBP-241ENST00000487169 FUT10Q6P4F1 479 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 CNSTQ6PJW8 725 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 ARPINQ7Z6K5 226 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 CMC1Q7Z7K0 106 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 STK32CQ86UX6 486 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 EXOC3L1Q86VI1 746 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 TMCO5AQ8N6Q1 288 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 PCDH20Q8N6Y1 951 aaKnown RBP13.47□□□□□ -0.25
HDLBP-241ENST00000487169 PLD5Q8N7P1 536 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 SLC4A11Q8NBS3 891 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 SLAIN1Q8ND83 568 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 REPS1Q96D71 796 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 MTFMTQ96DP5 389 aaKnown RBP13.47□□□□□ -0.25
HDLBP-241ENST00000487169 MYOCQ99972 504 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 BDH2Q9BUT1 245 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 FAM237BA0A1B0GVD1 139 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 MAGEA13PA6NCF6 341 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 FZD9O00144 591 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 ULK1O75385 1050 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 PKNOX1P55347 436 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 RAB10P61026 200 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 PRKCZQ05513 592 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 SAMD4BQ5PRF9 694 aaKnown RBP13.47□□□□□ -0.25
HDLBP-241ENST00000487169 CERCAMQ5T4B2 595 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 SMAD5Q99717 465 aaKnown RBP13.47□□□□□ -0.25
HDLBP-241ENST00000487169 SYBUQ9NX95 663 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 CFAP97Q9P2B7 532 aa13.47□□□□□ -0.25
HDLBP-241ENST00000487169 LDLRP01130 860 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 GSNP06396 782 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 GPR158Q5T848 1215 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 ADAMTSL2Q86TH1 951 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 DAW1Q8N136 415 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 CDYL2Q8N8U2 506 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 ATL1Q8WXF7 558 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 PCED1BQ96HM7 432 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 NDEL1Q9GZM8 345 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 FZD8Q9H461 694 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 GNPTGQ9UJJ9 305 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 VWA7Q9Y334 891 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 RGS5O15539 181 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 VPS4BO75351 444 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 SERPINI2O75830 405 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 BMP10O95393 424 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 TNFRSF8P28908 595 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 NEK2P51955 445 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 CDH13P55290 713 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 SCIMPQ6UWF3 145 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 SPATA6LQ8N4H0 392 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 MYLK2Q9H1R3 596 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 ZNHIT2Q9UHR6 403 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 ZNF711Q9Y462 761 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 LMO7Q8WWI1 1683 aa13.46□□□□□ -0.25
HDLBP-241ENST00000487169 HDAC3O15379 428 aa13.46□□□□□ -0.26
HDLBP-241ENST00000487169 SLC25A14O95258 325 aaPredicted RBP13.46□□□□□ -0.26
HDLBP-241ENST00000487169 ADSSP30520 456 aa13.46□□□□□ -0.26
HDLBP-241ENST00000487169 HNF4AP41235 474 aa13.46□□□□□ -0.26
HDLBP-241ENST00000487169 GUCA1AP43080 201 aaPredicted RBP13.46□□□□□ -0.26
HDLBP-241ENST00000487169 GRIA4P48058 902 aa13.46□□□□□ -0.26
HDLBP-241ENST00000487169 IRX1P78414 480 aaPredicted RBP13.46□□□□□ -0.26
HDLBP-241ENST00000487169 SNX30Q5VWJ9 437 aa13.46□□□□□ -0.26
HDLBP-241ENST00000487169 AMIGO3Q86WK7 504 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms