RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 JCHAINP01591 159 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 RHOCP08134 193 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 CTSHP09668 335 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 DPEP1P16444 411 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 TNFRSF8P28908 595 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 CCR3P51677 355 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 CCR4P51679 360 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 PPP2R2BQ00005 443 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 GPAT3Q53EU6 434 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 GPSM1Q86YR5 675 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 PGM2Q96G03 612 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 RSPH9Q9H1X1 276 aaPredicted RBP8.84□□□□□ -0.99
GABRE-209ENST00000486255 CDHR5Q9HBB8 845 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 ABCB9Q9NP78 766 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 SEMA4BQ9NPR2 832 aaPredicted RBP8.84□□□□□ -0.99
GABRE-209ENST00000486255 PRMT7Q9NVM4 692 aaPredicted RBP8.84□□□□□ -0.99
GABRE-209ENST00000486255 TAS2R13Q9NYV9 303 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 DMGDHQ9UI17 866 aaKnown RBP8.84□□□□□ -0.99
GABRE-209ENST00000486255 UMODL1Q5DID0 1318 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 AXIN1O15169 862 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 NCAM2O15394 837 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 OR56A5P0C7T3 313 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 VEGFAP15692 232 aaPredicted RBP8.84□□□□□ -0.99
GABRE-209ENST00000486255 NELFEP18615 380 aaKnown RBP8.84□□□□□ -0.99
GABRE-209ENST00000486255 TYMPP19971 482 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 FMO4P31512 558 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 NRG3P56975 720 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 PHC1P78364 1004 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 TKFCQ3LXA3 575 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 LDLRAP1Q5SW96 308 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 RNF220Q5VTB9 566 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 C16orf46Q6P387 395 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 NOTUMQ6P988 496 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 TRMT11Q7Z4G4 463 aaKnown RBP8.84□□□□□ -0.99
GABRE-209ENST00000486255 AMIGO2Q86SJ2 522 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 ZCCHC9Q8N567 271 aaKnown RBP8.84□□□□□ -0.99
GABRE-209ENST00000486255 TSEN2Q8NCE0 465 aaKnown RBP8.84□□□□□ -0.99
GABRE-209ENST00000486255 NSUN4Q96CB9 384 aaKnown RBP8.84□□□□□ -0.99
GABRE-209ENST00000486255 DMRTB1Q96MA1 342 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 TMEM168Q9H0V1 697 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 NKIRAS2Q9NYR9 191 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 ABCG2Q9UNQ0 655 aa8.84□□□□□ -0.99
GABRE-209ENST00000486255 A0A0B4J269 797 aa8.84□□□□□ -1
GABRE-209ENST00000486255 SPTLC1O15269 473 aa8.84□□□□□ -1
GABRE-209ENST00000486255 SNX3O60493 162 aa8.84□□□□□ -1
GABRE-209ENST00000486255 LSM8O95777 96 aaKnown RBP8.84□□□□□ -1
GABRE-209ENST00000486255 F9P00740 461 aa8.84□□□□□ -1
GABRE-209ENST00000486255 LRG1P02750 347 aa8.84□□□□□ -1
GABRE-209ENST00000486255 SERPINF2P08697 491 aa8.84□□□□□ -1
GABRE-209ENST00000486255 MBL2P11226 248 aaPredicted RBP8.84□□□□□ -1
GABRE-209ENST00000486255 PIK3CGP48736 1102 aa8.84□□□□□ -1
GABRE-209ENST00000486255 FCGRTP55899 365 aa8.84□□□□□ -1
GABRE-209ENST00000486255 NAA20P61599 178 aa8.84□□□□□ -1
GABRE-209ENST00000486255 TUBB3Q13509 450 aa8.84□□□□□ -1
GABRE-209ENST00000486255 C4orf46Q504U0 113 aa8.84□□□□□ -1
GABRE-209ENST00000486255 MTX3Q5HYI7 312 aa8.84□□□□□ -1
GABRE-209ENST00000486255 OAFQ86UD1 273 aa8.84□□□□□ -1
GABRE-209ENST00000486255 COLGALT2Q8IYK4 626 aa8.84□□□□□ -1
GABRE-209ENST00000486255 NEDD1Q8NHV4 660 aa8.84□□□□□ -1
GABRE-209ENST00000486255 RP9Q8TA86 221 aaKnown RBP8.84□□□□□ -1
GABRE-209ENST00000486255 IGDCC4Q8TDY8 1250 aa8.84□□□□□ -1
GABRE-209ENST00000486255 OPTCQ9UBM4 332 aa8.84□□□□□ -1
GABRE-209ENST00000486255 TRIM17Q9Y577 477 aa8.84□□□□□ -1
GABRE-209ENST00000486255 ZMYM2Q9UBW7 1377 aa8.83□□□□□ -1
GABRE-209ENST00000486255 METTL21EPA6NDL7 271 aa8.83□□□□□ -1
GABRE-209ENST00000486255 MATN2O00339 956 aa8.83□□□□□ -1
GABRE-209ENST00000486255 AP2A2O94973 939 aa8.83□□□□□ -1
GABRE-209ENST00000486255 UPP2O95045 317 aa8.83□□□□□ -1
GABRE-209ENST00000486255 CYP1A1P04798 512 aaPredicted RBP8.83□□□□□ -1
GABRE-209ENST00000486255 IFNA6P05013 189 aa8.83□□□□□ -1
GABRE-209ENST00000486255 FGFR1P11362 822 aa8.83□□□□□ -1
GABRE-209ENST00000486255 RPL4P36578 427 aaKnown RBP8.83□□□□□ -1
GABRE-209ENST00000486255 CES3Q6UWW8 571 aa8.83□□□□□ -1
GABRE-209ENST00000486255 PACS1Q6VY07 963 aa8.83□□□□□ -1
GABRE-209ENST00000486255 DENND6BQ8NEG7 585 aa8.83□□□□□ -1
GABRE-209ENST00000486255 PIK3R3Q92569 461 aa8.83□□□□□ -1
GABRE-209ENST00000486255 MXRA8Q9BRK3 442 aa8.83□□□□□ -1
GABRE-209ENST00000486255 SPATA5L1Q9BVQ7 753 aa8.83□□□□□ -1
GABRE-209ENST00000486255 OSGEPL1Q9H4B0 414 aa8.83□□□□□ -1
GABRE-209ENST00000486255 VIRMAQ69YN4 1812 aaKnown RBP8.83□□□□□ -1
GABRE-209ENST00000486255 ENDOD1O94919 500 aa8.83□□□□□ -1
GABRE-209ENST00000486255 PGRP06401 933 aa8.83□□□□□ -1
GABRE-209ENST00000486255 GARTP22102 1010 aa8.83□□□□□ -1
GABRE-209ENST00000486255 RENBPP51606 427 aa8.83□□□□□ -1
GABRE-209ENST00000486255 CA9Q16790 459 aa8.83□□□□□ -1
GABRE-209ENST00000486255 DEF8Q6ZN54 512 aa8.83□□□□□ -1
GABRE-209ENST00000486255 GCNT7Q6ZNI0 430 aa8.83□□□□□ -1
GABRE-209ENST00000486255 ACOT1Q86TX2 421 aa8.83□□□□□ -1
GABRE-209ENST00000486255 SPERTQ8NA61 448 aa8.83□□□□□ -1
GABRE-209ENST00000486255 DNAJB14Q8TBM8 379 aa8.83□□□□□ -1
GABRE-209ENST00000486255 PHF10Q8WUB8 498 aaKnown RBP8.83□□□□□ -1
GABRE-209ENST00000486255 PTCD2Q8WV60 388 aaKnown RBP8.83□□□□□ -1
GABRE-209ENST00000486255 EHD4Q9H223 541 aa8.83□□□□□ -1
GABRE-209ENST00000486255 EIF3KQ9UBQ5 218 aaKnown RBP8.83□□□□□ -1
GABRE-209ENST00000486255 KIAA1257Q9ULG3 409 aa8.83□□□□□ -1
GABRE-209ENST00000486255 RAB26Q9ULW5 256 aa8.83□□□□□ -1
GABRE-209ENST00000486255 SLC28A1O00337 649 aa8.83□□□□□ -1
GABRE-209ENST00000486255 ZC3H11AO75152 810 aaKnown RBP eCLIP8.83□□□□□ -17e-8■■■□□ 16.8
GABRE-209ENST00000486255 FBXO21O94952 628 aa8.83□□□□□ -1
GABRE-209ENST00000486255 SERPINA6P08185 405 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms