RNA–Protein interactions for RNA: ENST00000486239.1

DCLK1-207, Transcript of doublecortin like kinase 1, humanhuman

TSL 3

Gene DCLK1, Length 578 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-207ENST00000486239 RASA4O43374 803 aa13.83□□□□□ -0.2
DCLK1-207ENST00000486239 FTLP02792 175 aaPredicted RBP13.83□□□□□ -0.2
DCLK1-207ENST00000486239 PRLRP16471 622 aa13.83□□□□□ -0.2
DCLK1-207ENST00000486239 PCK1P35558 622 aa13.83□□□□□ -0.2
DCLK1-207ENST00000486239 ELP6Q0PNE2 266 aa13.83□□□□□ -0.2
DCLK1-207ENST00000486239 RFTN1Q14699 578 aaPredicted RBP13.83□□□□□ -0.2
DCLK1-207ENST00000486239 SHBQ15464 509 aa13.83□□□□□ -0.2
DCLK1-207ENST00000486239 RAB6CQ53S08 254 aa13.83□□□□□ -0.2
DCLK1-207ENST00000486239 TDRD12Q587J7 1177 aaKnown RBP13.83□□□□□ -0.2
DCLK1-207ENST00000486239 ZNF571Q7Z3V5 609 aaPredicted RBP13.83□□□□□ -0.2
DCLK1-207ENST00000486239 SPATS2Q86XZ4 545 aaKnown RBP13.83□□□□□ -0.2
DCLK1-207ENST00000486239 GATAD2AQ86YP4 633 aa13.83□□□□□ -0.2
DCLK1-207ENST00000486239 PNPLA1Q8N8W4 532 aa13.83□□□□□ -0.2
DCLK1-207ENST00000486239 ZNF653Q96CK0 615 aa13.83□□□□□ -0.2
DCLK1-207ENST00000486239 HMCESQ96FZ2 354 aa13.83□□□□□ -0.2
DCLK1-207ENST00000486239 DUSP23Q9BVJ7 150 aa13.83□□□□□ -0.2
DCLK1-207ENST00000486239 RAB6CQ9H0N0 254 aa13.83□□□□□ -0.2
DCLK1-207ENST00000486239 NCKIPSDQ9NZQ3 722 aa13.83□□□□□ -0.2
DCLK1-207ENST00000486239 CNOT8Q9UFF9 292 aaKnown RBP13.83□□□□□ -0.2
DCLK1-207ENST00000486239 FREM2Q5SZK8 3169 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 TMCO5BA8MYB1 307 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 DAPK3O43293 454 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 UGT2B4P06133 528 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 CKMT2P17540 419 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 XPAP23025 273 aaPredicted RBP13.82□□□□□ -0.2
DCLK1-207ENST00000486239 HCAR3P49019 387 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 HNRNPKP61978 463 aaKnown RBP eCLIP13.82□□□□□ -0.2
DCLK1-207ENST00000486239 MAPK8IP2Q13387 824 aaPredicted RBP13.82□□□□□ -0.2
DCLK1-207ENST00000486239 ZNF211Q13398 564 aaPredicted RBP13.82□□□□□ -0.2
DCLK1-207ENST00000486239 PTK2BQ14289 1009 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 CFAP58Q5T655 872 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 BRAT1Q6PJG6 821 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 GCNT7Q6ZNI0 430 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 KANSL1Q7Z3B3 1105 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 PTAR1Q7Z6K3 402 aaPredicted RBP13.82□□□□□ -0.2
DCLK1-207ENST00000486239 PARGQ86W56 976 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 CACTIN-AS1Q8N1I8 211 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 PYROXD2Q8N2H3 581 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 EID2Q8N6I1 236 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 ZNF641Q96N77 438 aaPredicted RBP13.82□□□□□ -0.2
DCLK1-207ENST00000486239 TUBGCP5Q96RT8 1024 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 C1QTNF2Q9BXJ5 285 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 CALN1Q9BXU9 219 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 ISCUQ9H1K1 167 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 DHX35Q9H5Z1 703 aaKnown RBP13.82□□□□□ -0.2
DCLK1-207ENST00000486239 CCDC86Q9H6F5 360 aaKnown RBP13.82□□□□□ -0.2
DCLK1-207ENST00000486239 NOL6Q9H6R4 1146 aaKnown RBP13.82□□□□□ -0.2
DCLK1-207ENST00000486239 LRRC19Q9H756 370 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 GPR27Q9NS67 375 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 TAS2R14Q9NYV8 317 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 LCMT1Q9UIC8 334 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 ZFR2Q9UPR6 939 aaKnown RBP13.82□□□□□ -0.2
DCLK1-207ENST00000486239 ACACAQ13085 2346 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 PLXNB3Q9ULL4 1909 aa13.82□□□□□ -0.2
DCLK1-207ENST00000486239 KNTC1P50748 2209 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 GOLGA4Q13439 2230 aaKnown RBP13.81□□□□□ -0.2
DCLK1-207ENST00000486239 ARID1BQ8NFD5 2236 aaPredicted RBP13.81□□□□□ -0.2
DCLK1-207ENST00000486239 SYCE3A1L190 88 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 AREL1O15033 823 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 PRAMEF11O60813 436 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 SERPING1P05155 500 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 ACP1P24666 158 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 NFKBIAP25963 317 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 ARL4AP40617 200 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 CSNK1DP48730 415 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 ACADVLP49748 655 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 UBASH3AP57075 661 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 YPEL5P62699 121 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 ZBED6P86452 979 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 FANCCQ00597 558 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 E2F1Q01094 437 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 OGDHQ02218 1023 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 PIGHQ14442 188 aaPredicted RBP13.81□□□□□ -0.2
DCLK1-207ENST00000486239 BOLA3Q53S33 107 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 SEL1L3Q68CR1 1132 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 ERAP2Q6P179 960 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 RFX8Q6ZV50 586 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 TTC7BQ86TV6 843 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 PROSER1Q86XN7 944 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 PDCD7Q8N8D1 485 aaKnown RBP13.81□□□□□ -0.2
DCLK1-207ENST00000486239 OR4C6Q8NH72 309 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 CXorf40AQ8TE69 158 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 BTN2A2Q8WVV5 523 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 TSC1Q92574 1164 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 TBATAQ96M53 351 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 KLHL32Q96NJ5 620 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 SNRNP25Q9BV90 132 aaKnown RBP13.81□□□□□ -0.2
DCLK1-207ENST00000486239 CBX8Q9HC52 389 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 PKD1L2Q7Z442 2459 aa13.81□□□□□ -0.2
DCLK1-207ENST00000486239 SPTY2D1-AS1A0A0U1RR47 76 aa13.8□□□□□ -0.2
DCLK1-207ENST00000486239 A0A1W2PQ67 120 aa13.8□□□□□ -0.2
DCLK1-207ENST00000486239 TSPAN11A1L157 253 aa13.8□□□□□ -0.2
DCLK1-207ENST00000486239 GOLGA8CPA6NN73 597 aa13.8□□□□□ -0.2
DCLK1-207ENST00000486239 H3BRJ5 948 aa13.8□□□□□ -0.2
DCLK1-207ENST00000486239 DDX3XO00571 662 aaKnown RBP eCLIP13.8□□□□□ -0.2
DCLK1-207ENST00000486239 ATMINO43313 823 aaPredicted RBP13.8□□□□□ -0.2
DCLK1-207ENST00000486239 LRCH4O75427 683 aa13.8□□□□□ -0.2
DCLK1-207ENST00000486239 TM7SF2O76062 418 aa13.8□□□□□ -0.2
DCLK1-207ENST00000486239 PAK4O96013 591 aaPredicted RBP13.8□□□□□ -0.2
DCLK1-207ENST00000486239 SERPINA4P29622 427 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms