RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 CFAP69A5D8W1 941 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 GOLGA6CA6NDK9 693 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 GOLGA6BA6NDN3 693 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 K7ERQ8 282 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 KIF2AO00139 706 aaPredicted RBP8.38□□□□□ -1.07
SF3A1-208ENST00000485618 CES2O00748 559 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 NEMP1O14524 444 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 DDX3YO15523 660 aaKnown RBP8.38□□□□□ -1.07
SF3A1-208ENST00000485618 MFSD11O43934 449 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 CEP104O60308 925 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 RNASEH2AO75792 299 aaKnown RBP8.38□□□□□ -1.07
SF3A1-208ENST00000485618 JCHAINP01591 159 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 IGLV3-19P01714 112 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 RETP07949 1114 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 SERPINF2P08697 491 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 GOLGA6DP0CG33 693 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 C7P10643 843 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 PRLRP16471 622 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 CD6P30203 668 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 STIP1P31948 543 aaKnown RBP8.38□□□□□ -1.07
SF3A1-208ENST00000485618 PSMD8P48556 350 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 SCNN1BP51168 640 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 TPMTP51580 245 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 EIF3EP60228 445 aaKnown RBP8.38□□□□□ -1.07
SF3A1-208ENST00000485618 IFI35P80217 286 aaPredicted RBP8.38□□□□□ -1.07
SF3A1-208ENST00000485618 SRSF5Q13243 272 aaKnown RBP8.38□□□□□ -1.07
SF3A1-208ENST00000485618 SIM2Q14190 667 aaPredicted RBP8.38□□□□□ -1.07
SF3A1-208ENST00000485618 PRPSAP1Q14558 356 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 CYTH1Q15438 398 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 SLC45A4Q5BKX6 768 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 ZNF805Q5CZA5 627 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 ARSIQ5FYB1 569 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 PPM1JQ5JR12 505 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 ITPRIPL1Q6GPH6 555 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 ERAP2Q6P179 960 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 NEK5Q6P3R8 708 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 BRAT1Q6PJG6 821 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 C4orf22Q6V702 233 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 GDPD4Q6W3E5 623 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 LEKR1Q6ZMV7 388 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 DPY19L3Q6ZPD9 716 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 RABEPKQ7Z6M1 372 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 SRLQ86TD4 932 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 SLC13A5Q86YT5 568 aaPredicted RBP8.38□□□□□ -1.07
SF3A1-208ENST00000485618 HDDC3Q8N4P3 179 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 ZNF366Q8N895 744 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 CADM4Q8NFZ8 388 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 MAML1Q92585 1016 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 ALG3Q92685 438 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 LOXL4Q96JB6 756 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 NUDCD1Q96RS6 583 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 SRPK1Q96SB4 655 aaKnown RBP8.38□□□□□ -1.07
SF3A1-208ENST00000485618 FAM129BQ96TA1 746 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 HDAC8Q9BY41 377 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 TM6SF2Q9BZW4 377 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 ZDHHC6Q9H6R6 413 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 PDFQ9HBH1 243 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 GOLGA6AQ9NYA3 693 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 DKK3Q9UBP4 350 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 RNF14Q9UBS8 474 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 TTLL3Q9Y4R7 772 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 CHD6Q8TD26 2715 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 CEP250Q9BV73 2442 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 ZNF292O60281 2723 aa8.38□□□□□ -1.07
SF3A1-208ENST00000485618 NCOR2Q9Y618 2525 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 A0A0U1RQJ8 604 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 SLC30A4O14863 429 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 MID1O15344 667 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 INSIG1O15503 277 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 FOXD2O60548 495 aaPredicted RBP8.37□□□□□ -1.07
SF3A1-208ENST00000485618 SOCS5O75159 536 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 LEFTY1O75610 366 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 ADRB1P08588 477 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 RBP3P10745 1247 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 CHRM1P11229 460 aaPredicted RBP8.37□□□□□ -1.07
SF3A1-208ENST00000485618 GNSP15586 552 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 ITGB7P26010 798 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 CASQ1P31415 396 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 P2RY2P41231 377 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 PAFAH1B1P43034 410 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 MARCKSL1P49006 195 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 PXNP49023 591 aaPredicted RBP8.37□□□□□ -1.07
SF3A1-208ENST00000485618 NUMBP49757 651 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 COPAP53621 1224 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 RPL26P61254 145 aaKnown RBP8.37□□□□□ -1.07
SF3A1-208ENST00000485618 RPL6Q02878 288 aaKnown RBP8.37□□□□□ -1.07
SF3A1-208ENST00000485618 DMWDQ09019 674 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 SLC10A7Q0GE19 358 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 ELP6Q0PNE2 266 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 ZNF211Q13398 564 aaPredicted RBP8.37□□□□□ -1.07
SF3A1-208ENST00000485618 NOMO1Q15155 1222 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 LLGL1Q15334 1064 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 ST3GAL2Q16842 350 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 LONRF2Q1L5Z9 754 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 WDR45BQ5MNZ6 344 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 PRR23CQ6ZRP0 262 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 ERN2Q76MJ5 926 aaKnown RBP8.37□□□□□ -1.07
SF3A1-208ENST00000485618 TTC7BQ86TV6 843 aa8.37□□□□□ -1.07
SF3A1-208ENST00000485618 ZC3H18Q86VM9 953 aaKnown RBP8.37□□□□□ -1.07
SF3A1-208ENST00000485618 TSEN2Q8NCE0 465 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms