RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 DLG4P78352 724 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 STAT4Q14765 748 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 CDKN3Q16667 212 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 POM121L1PQ3SYA9 428 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 ANKRD39Q53RE8 183 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 TBC1D3GQ6DHY5 549 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 SLFN12LQ6IEE8 588 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 TBC1D3CQ6IPX1 549 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 NAPEPLDQ6IQ20 393 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 BORAQ6PGQ7 559 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 DPH6Q7L8W6 267 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 LIMS2Q7Z4I7 341 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 MMAAQ8IVH4 418 aaKnown RBP5.54□□□□□ -1.52
PTPN4-210ENST00000485247 TBC1D3Q8IZP1 549 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-210ENST00000485247 MYCT1Q8N699 235 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 OR6B3Q8NGW1 331 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 OR14C36Q8NHC7 312 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 DDI1Q8WTU0 396 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 POMGNT1Q8WZA1 660 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 HPDLQ96IR7 371 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 MRPL45Q9BRJ2 306 aaKnown RBP5.54□□□□□ -1.52
PTPN4-210ENST00000485247 FAM213AQ9BRX8 229 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 MTMR12Q9C0I1 747 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 RSPH9Q9H1X1 276 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-210ENST00000485247 SNX25Q9H3E2 840 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 ZHX3Q9H4I2 956 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 TLR8Q9NR97 1041 aaKnown RBP5.54□□□□□ -1.52
PTPN4-210ENST00000485247 SEPT10Q9P0V9 454 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 SEL1LQ9UBV2 794 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 ITGA11Q9UKX5 1188 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 CA5BQ9Y2D0 317 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 EFR3BQ9Y2G0 817 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 R3HCC1Q9Y3T6 440 aaKnown RBP5.54□□□□□ -1.52
PTPN4-210ENST00000485247 ZNF451Q9Y4E5 1061 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 U3KQA8 63 aa5.54□□□□□ -1.52
PTPN4-210ENST00000485247 LRRK1Q38SD2 2015 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 MYH11P35749 1972 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 KIF26BQ2KJY2 2108 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 LRBAP50851 2863 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-210ENST00000485247 OR14I1A6ND48 311 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 K7ESM1 405 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 AGRPO00253 132 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 PLD2O14939 933 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 MAGEC1O60732 1142 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 PIAS2O75928 621 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 NEBLO76041 1014 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 STC2O76061 302 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 CYBBP04839 570 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 HMBSP08397 361 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 PLA2G4BP0C869 781 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 ZSCAN22P10073 491 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-210ENST00000485247 ALPPL2P10696 532 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 LIPCP11150 499 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 RARGP13631 454 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 HGFP14210 728 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 PNLIPP16233 465 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 CD247P20963 164 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 GNLYP22749 145 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 HLA-FP30511 346 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 ADPRHP54922 357 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 SLC12A3P55017 1021 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 MLLT10P55197 1068 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 POU5F1Q01860 360 aaKnown RBP5.53□□□□□ -1.52
PTPN4-210ENST00000485247 ZNF177Q13360 481 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-210ENST00000485247 TRIM29Q14134 588 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 CST6Q15828 149 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 TTC38Q5R3I4 469 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 GUSBP11Q6P575 273 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 CHST9Q7L1S5 443 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 EFL1Q7Z2Z2 1120 aaKnown RBP5.53□□□□□ -1.52
PTPN4-210ENST00000485247 PRPF39Q86UA1 669 aaKnown RBP5.53□□□□□ -1.52
PTPN4-210ENST00000485247 ZC3H18Q86VM9 953 aaKnown RBP5.53□□□□□ -1.52
PTPN4-210ENST00000485247 ZFAND4Q86XD8 727 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 FBXO39Q8N4B4 442 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 C4orf32Q8N8J7 132 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 IGSF22Q8N9C0 903 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 SYT2Q8N9I0 419 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-210ENST00000485247 B3GALNT2Q8NCR0 500 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 ZSWIM2Q8NEG5 633 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 NOC3LQ8WTT2 800 aaKnown RBP5.53□□□□□ -1.52
PTPN4-210ENST00000485247 SAAL1Q96ER3 474 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 JMJD8Q96S16 334 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 REEP2Q9BRK0 252 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 MED10Q9BTT4 135 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 MMTAG2Q9BU76 263 aaKnown RBP5.53□□□□□ -1.52
PTPN4-210ENST00000485247 SLC2A11Q9BYW1 496 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 RAB34Q9BZG1 259 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 SYNDIG1Q9H7V2 258 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 OSER1Q9NX31 292 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 RBAKQ9NYW8 714 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-210ENST00000485247 NLGN3Q9NZ94 848 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 IL37Q9NZH6 218 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 KCND2Q9NZV8 630 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 SUN2Q9UH99 717 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 SCML1Q9UN30 329 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.53□□□□□ -1.52
PTPN4-210ENST00000485247 PCDHGA7Q9Y5G6 932 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 CYP46A1Q9Y6A2 500 aa5.53□□□□□ -1.52
PTPN4-210ENST00000485247 STYXL1Q9Y6J8 313 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms