RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 RGS7P49802 495 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 TERF1P54274 439 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 CLDN2P57739 230 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 DEFB133Q30KQ1 61 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 RABGAP1LQ5R372 815 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 COX20Q5RI15 118 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 PIP5KL1Q5T9C9 394 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 ZNF468Q5VIY5 522 aaPredicted RBP8.72□□□□□ -1.01
DDX39B-221ENST00000484566 TTC39BQ5VTQ0 682 aaPredicted RBP8.72□□□□□ -1.01
DDX39B-221ENST00000484566 RAP1GAP2Q684P5 730 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 OR6B2Q6IFH4 312 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 SHC4Q6S5L8 630 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 KYAT3Q6YP21 454 aaKnown RBP8.72□□□□□ -1.01
DDX39B-221ENST00000484566 GCNT7Q6ZNI0 430 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 Q6ZSR6 202 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 ABI3BPQ7Z7G0 1075 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 FBXL13Q8NEE6 735 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 UBA3Q8TBC4 463 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 DQX1Q8TE96 717 aaKnown RBP8.72□□□□□ -1.01
DDX39B-221ENST00000484566 TRIM44Q96DX7 344 aaPredicted RBP8.72□□□□□ -1.01
DDX39B-221ENST00000484566 SCARF2Q96GP6 870 aaPredicted RBP8.72□□□□□ -1.01
DDX39B-221ENST00000484566 ZNF396Q96N95 335 aaPredicted RBP8.72□□□□□ -1.01
DDX39B-221ENST00000484566 NOX5Q96PH1 765 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 UPF2Q9HAU5 1272 aaKnown RBP8.72□□□□□ -1.01
DDX39B-221ENST00000484566 EPB41L5Q9HCM4 733 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 SEPT10Q9P0V9 454 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 IPO11Q9UI26 975 aaKnown RBP8.72□□□□□ -1.01
DDX39B-221ENST00000484566 SALL4Q9UJQ4 1053 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 TRAF3IP3Q9Y228 551 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 CSNK1G3Q9Y6M4 447 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 SPG11Q96JI7 2443 aa8.72□□□□□ -1.01
DDX39B-221ENST00000484566 TCAF2A6NFQ2 919 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 M0QYV0 167 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 RNF225M0QZC1 329 aaPredicted RBP8.71□□□□□ -1.02
DDX39B-221ENST00000484566 O00370 1275 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 PIK3R2O00459 728 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 TPP1O14773 563 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 SART1O43290 800 aaKnown RBP8.71□□□□□ -1.02
DDX39B-221ENST00000484566 AQP9O43315 295 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 KLRC4O43908 158 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 YEATS4O95619 227 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 LIPCP11150 499 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 VDRP11473 427 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 ITGB6P18564 788 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 PTMSP20962 102 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 TACR2P21452 398 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 RPL13P26373 211 aaKnown RBP8.71□□□□□ -1.02
DDX39B-221ENST00000484566 TNFRSF8P28908 595 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 SLC5A2P31639 672 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 PSMC2P35998 433 aaKnown RBP8.71□□□□□ -1.02
DDX39B-221ENST00000484566 IDH3AP50213 366 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 ARSDP51689 593 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 PDX1P52945 283 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 TAS2R38P59533 333 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 NAA30Q147X3 362 aaPredicted RBP8.71□□□□□ -1.02
DDX39B-221ENST00000484566 DRAP1Q14919 205 aaPredicted RBP8.71□□□□□ -1.02
DDX39B-221ENST00000484566 ZNF284Q2VY69 593 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 MANEAQ5SRI9 462 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 SLCO4C1Q6ZQN7 724 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 GRAMD1CQ8IYS0 662 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 CCAR2Q8N163 923 aaKnown RBP8.71□□□□□ -1.02
DDX39B-221ENST00000484566 FBXO39Q8N4B4 442 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 LMX1AQ8TE12 382 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 SEMA4DQ92854 862 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 FAM149B1Q96BN6 582 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 PPP1R16AQ96I34 528 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 TRIM62Q9BVG3 475 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 STRADBQ9C0K7 418 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 SLC25A18Q9H1K4 315 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 RAB20Q9NX57 234 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 PLEKHB1Q9UF11 243 aaPredicted RBP8.71□□□□□ -1.02
DDX39B-221ENST00000484566 ACSL6Q9UKU0 697 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 ABCA2Q9BZC7 2435 aa8.71□□□□□ -1.02
DDX39B-221ENST00000484566 HIVEP1P15822 2718 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 SPTY2D1-AS1A0A0U1RR47 76 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 TMX2-CTNND1H3BSU7 103 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 PRNPP04156 253 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 JMJD7P0C870 316 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 CHRNA3P32297 505 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 UGT1A5P35504 534 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 RABIFP47224 123 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 PLK1P53350 603 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 CUL2Q13617 745 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 CUL4AQ13619 759 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 PDE1CQ14123 709 aaPredicted RBP8.7□□□□□ -1.02
DDX39B-221ENST00000484566 FZD2Q14332 565 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 DLG2Q15700 870 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 NFIL3Q16649 462 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 C8orf34Q49A92 452 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 PERM1Q5SV97 790 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 SEL1L3Q68CR1 1132 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 KIAA1161Q6NSJ0 714 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 ESRP1Q6NXG1 681 aaKnown RBP8.7□□□□□ -1.02
DDX39B-221ENST00000484566 PMF1Q6P1K2 205 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 LCLAT1Q6UWP7 414 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 RAB11FIP2Q7L804 512 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 SYT9Q86SS6 491 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 TAC4Q86UU9 113 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 CIR1Q86X95 450 aaPredicted RBP8.7□□□□□ -1.02
DDX39B-221ENST00000484566 FAM26EQ8N5C1 309 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms