RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 IL25Q9H293 177 aa5.13□□□□□ -1.59
CCDC66-219ENST00000484441 C6orf106Q9H6K1 298 aaPredicted RBP5.13□□□□□ -1.59
CCDC66-219ENST00000484441 SUFUQ9UMX1 484 aa5.13□□□□□ -1.59
CCDC66-219ENST00000484441 C17orf113A0A1B0GUU1 675 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 A0A1B0GUV1 79 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 SH2D7A6NKC9 451 aaPredicted RBP5.12□□□□□ -1.59
CCDC66-219ENST00000484441 ANP32CO43423 234 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 ITM2AO43736 263 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 MYF6P23409 242 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 MXI1P50539 228 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 BLKP51451 505 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 LPIN1Q14693 890 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 PLCB4Q15147 1175 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 DCAF6Q58WW2 860 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 C9orf57Q5W0N0 161 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 C17orf99Q6UX52 265 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 PRSS45Q7RTY3 260 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 C16orf82Q7Z2V1 217 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 RASSF8Q8NHQ8 419 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 HERVK_113Q902F9 699 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 RNF183Q96D59 192 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 REEP2Q9BRK0 252 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 SLC25A33Q9BSK2 321 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.12□□□□□ -1.59
CCDC66-219ENST00000484441 PHF7Q9BWX1 381 aaPredicted RBP5.12□□□□□ -1.59
CCDC66-219ENST00000484441 CDT1Q9H211 546 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 ANKRD10Q9NXR5 420 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 IFT80Q9P2H3 777 aaPredicted RBP5.12□□□□□ -1.59
CCDC66-219ENST00000484441 ADGRF5Q8IZF2 1346 aa5.12□□□□□ -1.59
CCDC66-219ENST00000484441 IGLV5-52A0A0A0MRZ9 124 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 SRRM3A6NNA2 597 aaPredicted RBP5.11□□□□□ -1.59
CCDC66-219ENST00000484441 PEX12O00623 359 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 KLK10O43240 276 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 KCNJ13O60928 360 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 WEE2P0C1S8 567 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 RYKP34925 604 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 PPFIA1Q13136 1202 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 NFATC4Q14934 902 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 PRAMEF19Q5SWL8 479 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 PRSS57Q6UWY2 283 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 IL20RBQ6UXL0 311 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 DLK2Q6UY11 383 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 CREB3L2Q70SY1 520 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 FJX1Q86VR8 437 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 MON1AQ86VX9 555 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 DNAAF1Q8NEP3 725 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 TAOK3Q9H2K8 898 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 EPHX3Q9H6B9 360 aa5.11□□□□□ -1.59
CCDC66-219ENST00000484441 SPATS2LQ9NUQ6 558 aaKnown RBP5.11□□□□□ -1.59
CCDC66-219ENST00000484441 A0A0U1RQJ8 604 aa5.1□□□□□ -1.59
CCDC66-219ENST00000484441 A0A1B0GVM2 712 aa5.1□□□□□ -1.59
CCDC66-219ENST00000484441 DYTNA2CJ06 578 aa5.1□□□□□ -1.59
CCDC66-219ENST00000484441 KDM4EB2RXH2 506 aaPredicted RBP5.1□□□□□ -1.59
CCDC66-219ENST00000484441 PER2O15055 1255 aa5.1□□□□□ -1.59
CCDC66-219ENST00000484441 HLFQ16534 295 aa5.1□□□□□ -1.59
CCDC66-219ENST00000484441 WDR45BQ5MNZ6 344 aa5.1□□□□□ -1.59
CCDC66-219ENST00000484441 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.1□□□□□ -1.59
CCDC66-219ENST00000484441 ARMC9Q7Z3E5 817 aa5.1□□□□□ -1.59
CCDC66-219ENST00000484441 CPXM2Q8N436 756 aa5.1□□□□□ -1.59
CCDC66-219ENST00000484441 AADATQ8N5Z0 425 aa5.1□□□□□ -1.59
CCDC66-219ENST00000484441 LMO3Q8TAP4 145 aa5.1□□□□□ -1.59
CCDC66-219ENST00000484441 CNOT9Q92600 299 aaKnown RBP5.1□□□□□ -1.59
CCDC66-219ENST00000484441 FIZ1Q96SL8 496 aa5.1□□□□□ -1.59
CCDC66-219ENST00000484441 YME1L1Q96TA2 773 aa5.1□□□□□ -1.59
CCDC66-219ENST00000484441 ZNF556Q9HAH1 456 aa5.1□□□□□ -1.59
CCDC66-219ENST00000484441 TMEM51Q9NW97 253 aa5.1□□□□□ -1.59
CCDC66-219ENST00000484441 BTBD18B2RXH4 712 aa5.09□□□□□ -1.59
CCDC66-219ENST00000484441 TIMM23O14925 209 aa5.09□□□□□ -1.59
CCDC66-219ENST00000484441 SRD5A1P18405 259 aa5.09□□□□□ -1.59
CCDC66-219ENST00000484441 C21orf33P30042 268 aaPredicted RBP5.09□□□□□ -1.59
CCDC66-219ENST00000484441 CXCR3P49682 368 aa5.09□□□□□ -1.59
CCDC66-219ENST00000484441 CCR5P51681 352 aa5.09□□□□□ -1.59
CCDC66-219ENST00000484441 TUBA1BP68363 451 aa5.09□□□□□ -1.59
CCDC66-219ENST00000484441 CAPSQ13938 189 aa5.09□□□□□ -1.59
CCDC66-219ENST00000484441 CCDC129Q6ZRS4 1044 aa5.09□□□□□ -1.59
CCDC66-219ENST00000484441 CPOQ8IVL8 374 aa5.09□□□□□ -1.59
CCDC66-219ENST00000484441 SFTPA2Q8IWL1 248 aa5.09□□□□□ -1.59
CCDC66-219ENST00000484441 TCP11L2Q8N4U5 519 aa5.09□□□□□ -1.59
CCDC66-219ENST00000484441 RFWD2Q8NHY2 731 aa5.09□□□□□ -1.59
CCDC66-219ENST00000484441 CD180Q99467 661 aa5.09□□□□□ -1.59
CCDC66-219ENST00000484441 MROH8Q9H579 483 aa5.09□□□□□ -1.59
CCDC66-219ENST00000484441 DDX31Q9H8H2 851 aaKnown RBP5.09□□□□□ -1.59
CCDC66-219ENST00000484441 A0A0U1RQF3 1178 aa5.08□□□□□ -1.6
CCDC66-219ENST00000484441 LINC01553A4QN01 128 aa5.08□□□□□ -1.6
CCDC66-219ENST00000484441 WNT9BO14905 357 aa5.08□□□□□ -1.6
CCDC66-219ENST00000484441 SLC25A17O43808 307 aa5.08□□□□□ -1.6
CCDC66-219ENST00000484441 CEP104O60308 925 aa5.08□□□□□ -1.6
CCDC66-219ENST00000484441 SERPINI2O75830 405 aa5.08□□□□□ -1.6
CCDC66-219ENST00000484441 ZBTB11O95625 1053 aaPredicted RBP5.08□□□□□ -1.6
CCDC66-219ENST00000484441 FMO4P31512 558 aa5.08□□□□□ -1.6
CCDC66-219ENST00000484441 GAS1P54826 345 aa5.08□□□□□ -1.6
CCDC66-219ENST00000484441 GDPD5Q8WTR4 605 aa5.08□□□□□ -1.6
CCDC66-219ENST00000484441 TMED6Q8WW62 240 aa5.08□□□□□ -1.6
CCDC66-219ENST00000484441 SNAPC3Q92966 411 aa5.08□□□□□ -1.6
CCDC66-219ENST00000484441 RTP4Q96DX8 246 aa5.08□□□□□ -1.6
CCDC66-219ENST00000484441 NDRG3Q9UGV2 375 aa5.08□□□□□ -1.6
CCDC66-219ENST00000484441 PCDHGB1Q9Y5G3 927 aa5.08□□□□□ -1.6
CCDC66-219ENST00000484441 SCN5AQ14524 2016 aa5.07□□□□□ -1.6
CCDC66-219ENST00000484441 GOLGA6L10A0A0M3HER8 536 aa5.07□□□□□ -1.6
CCDC66-219ENST00000484441 PABPN1LA6NDY0 278 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms