RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 TSPAN11A1L157 253 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 RCCD1A6NED2 376 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 C16orf96A6NNT2 1141 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 C4orf47A7E2U8 309 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 MFSD11O43934 449 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 IPO7O95373 1038 aaKnown RBP18.24■□□□□ 0.51
HDAC6-225ENST00000483506 UGT2B4P06133 528 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 COMTP21964 271 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 GALNT2Q10471 571 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 GDPD4Q6W3E5 623 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 ZSCAN30Q86W11 494 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 RHOT1Q8IXI2 618 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 ATPAF2Q8N5M1 289 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 RNF157Q96PX1 679 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 TUBGCP5Q96RT8 1024 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 FSCN3Q9NQT6 498 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 DNAAF2Q9NVR5 837 aaKnown RBP18.24■□□□□ 0.51
HDAC6-225ENST00000483506 SEPT3Q9UH03 358 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 TFR2Q9UP52 801 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 DMTF1Q9Y222 760 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 FADS3Q9Y5Q0 445 aa18.24■□□□□ 0.51
HDAC6-225ENST00000483506 ASCC3Q8N3C0 2202 aaKnown RBP18.24■□□□□ 0.51
HDAC6-225ENST00000483506 KNL1Q8NG31 2342 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 CNOT1A5YKK6 2376 aaKnown RBP18.23■□□□□ 0.51
HDAC6-225ENST00000483506 DOCK9Q9BZ29 2069 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 INSIG1O15503 277 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 PJA2O43164 708 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 PSTPIP1O43586 416 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 GJB3O75712 270 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 HSPA9P38646 679 aaKnown RBP18.23■□□□□ 0.51
HDAC6-225ENST00000483506 NOP2P46087 812 aaKnown RBP18.23■□□□□ 0.51
HDAC6-225ENST00000483506 RGRP47804 291 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 RENBPP51606 427 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 LBRQ14739 615 aaKnown RBP18.23■□□□□ 0.51
HDAC6-225ENST00000483506 TEAD4Q15561 434 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 TMEM259Q4ZIN3 620 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 SETMARQ53H47 684 aaPredicted RBP18.23■□□□□ 0.51
HDAC6-225ENST00000483506 FBXL19Q6PCT2 694 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 IL27RAQ6UWB1 636 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 PRPF39Q86UA1 669 aaKnown RBP18.23■□□□□ 0.51
HDAC6-225ENST00000483506 HORMAD1Q86X24 394 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 SPC24Q8NBT2 197 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 TSEN2Q8NCE0 465 aaKnown RBP18.23■□□□□ 0.51
HDAC6-225ENST00000483506 FATE1Q969F0 183 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 EXOC2Q96KP1 924 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 ZNF641Q96N77 438 aaPredicted RBP18.23■□□□□ 0.51
HDAC6-225ENST00000483506 SLC6A18Q96N87 628 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 KLHL32Q96NJ5 620 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 CINPQ9BW66 212 aaPredicted RBP18.23■□□□□ 0.51
HDAC6-225ENST00000483506 DDX56Q9NY93 547 aaKnown RBP18.23■□□□□ 0.51
HDAC6-225ENST00000483506 SALL4Q9UJQ4 1053 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 ALG6Q9Y672 507 aa18.23■□□□□ 0.51
HDAC6-225ENST00000483506 A0A1W2PR77 199 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 LRRD1A4D1F6 860 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 AREL1O15033 823 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 MUSKO15146 869 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 VILLO15195 856 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 SPINT1O43278 529 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 SPOPO43791 374 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 RNGTTO60942 597 aaKnown RBP18.22■□□□□ 0.51
HDAC6-225ENST00000483506 CR2P20023 1033 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 GARSP41250 739 aaKnown RBP18.22■□□□□ 0.51
HDAC6-225ENST00000483506 ABL2P42684 1182 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 MAPK8P45983 427 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 CSNK1EP49674 416 aaKnown RBP18.22■□□□□ 0.51
HDAC6-225ENST00000483506 SUOXP51687 545 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 VAV2P52735 878 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 SLC10A7Q0GE19 358 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 TAZQ16635 292 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 ZNF284Q2VY69 593 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 SLC9A4Q6AI14 798 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 NAPEPLDQ6IQ20 393 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 KIAA1161Q6NSJ0 714 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 SRLQ86TD4 932 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 MINDY1Q8N5J2 469 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 TPCN2Q8NHX9 752 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 TSGA13Q96PP4 275 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 ZFR2Q9UPR6 939 aaKnown RBP18.22■□□□□ 0.51
HDAC6-225ENST00000483506 SHROOM3Q8TF72 1996 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 TRPM6Q9BX84 2022 aa18.22■□□□□ 0.51
HDAC6-225ENST00000483506 ANKRD36A6QL64 1941 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 TP53BP1Q12888 1972 aaPredicted RBP18.21■□□□□ 0.51
HDAC6-225ENST00000483506 A0A1B0GVT2 93 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 A0A1W2PQU0 124 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 GOLGA6L6A8MZA4 724 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 UPK3BL1B0FP48 263 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 UPK3BL2E5RIL1 263 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 TSPAN6O43657 245 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 KRT1P04264 644 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 ATXN3P54252 364 aaPredicted RBP18.21■□□□□ 0.51
HDAC6-225ENST00000483506 GSDMDP57764 484 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 AP1S1P61966 158 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 ZFYVE27Q5T4F4 411 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 TEX26Q8N6G2 289 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 PLD5Q8N7P1 536 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 TMEM145Q8NBT3 493 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 ACRBPQ8NEB7 543 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 SPOCK2Q92563 424 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 MAML1Q92585 1016 aa18.21■□□□□ 0.51
HDAC6-225ENST00000483506 SERAC1Q96JX3 654 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms