RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 PIP5K1AQ99755 562 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 PDCL3Q9H2J4 239 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 RANBP17Q9H2T7 1088 aaKnown RBP6.01□□□□□ -1.45
SF3B1-210ENST00000482158 KLHL31Q9H511 634 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 ZBTB40Q9NUA8 1239 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 PSAT1Q9Y617 370 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 CAPN7Q9Y6W3 813 aa6.01□□□□□ -1.45
SF3B1-210ENST00000482158 A0A096LPK6 155 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 LY6G6EA0A0G2JKS1 128 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 DNAJC9-AS1A6NH13 148 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 STMND1H3BQB6 276 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 MYZAPP0CAP1 466 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 PTPN2P17706 415 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 MMP13P45452 471 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 GPR12P47775 334 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 PPP3CCP48454 512 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 YWHAZP63104 245 aaKnown RBP6□□□□□ -1.45
SF3B1-210ENST00000482158 NEXNQ0ZGT2 675 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 LAMB3Q13751 1172 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 RABEP1Q15276 862 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 RNPS1Q15287 305 aaKnown RBP6□□□□□ -1.45
SF3B1-210ENST00000482158 ETFDHQ16134 617 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 DUSP6Q16828 381 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 CCDC142Q17RM4 750 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 EPHA10Q5JZY3 1008 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 ATG9BQ674R7 924 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 PXKQ7Z7A4 578 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 DHX40Q8IX18 779 aaKnown RBP6□□□□□ -1.45
SF3B1-210ENST00000482158 MMP21Q8N119 569 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 CADM4Q8NFZ8 388 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 MPLKIPQ8TAP9 179 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 RPL36ALQ969Q0 106 aaKnown RBP6□□□□□ -1.45
SF3B1-210ENST00000482158 ZNF333Q96JL9 665 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 YME1L1Q96TA2 773 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 INTS6Q9UL03 887 aaKnown RBP6□□□□□ -1.45
SF3B1-210ENST00000482158 RAI2Q9Y5P3 530 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 HS3ST3B1Q9Y662 390 aa6□□□□□ -1.45
SF3B1-210ENST00000482158 PI4KAP2A4QPH2 592 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 KLRF2D3W0D1 207 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 KIF1CO43896 1103 aaKnown RBP5.99□□□□□ -1.45
SF3B1-210ENST00000482158 CHRNB2P17787 502 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 SRD5A1P18405 259 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 CHMP24386 653 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 DCTDP32321 178 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 RFC1P35251 1148 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-210ENST00000482158 EIF3BP55884 814 aaKnown RBP5.99□□□□□ -1.45
SF3B1-210ENST00000482158 RPS3AP61247 264 aaKnown RBP5.99□□□□□ -1.45
SF3B1-210ENST00000482158 SLC45A4Q5BKX6 768 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 Q5PR19 223 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 SLC16A12Q6ZSM3 486 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 SLC46A3Q7Z3Q1 461 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 CPLX4Q7Z7G2 160 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 KIAA2013Q8IYS2 634 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 RBFAQ8N0V3 343 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 ITPAQ9BY32 194 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 POLDIP3Q9BY77 421 aaKnown RBP5.99□□□□□ -1.45
SF3B1-210ENST00000482158 NUF2Q9BZD4 464 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 LHPPQ9H008 270 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 PLEKHA4Q9H4M7 779 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 SCPEP1Q9HB40 452 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 SPATS2LQ9NUQ6 558 aaKnown RBP5.99□□□□□ -1.45
SF3B1-210ENST00000482158 NCKIPSDQ9NZQ3 722 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 A4GNTQ9UNA3 340 aa5.99□□□□□ -1.45
SF3B1-210ENST00000482158 GAGE12JA6NER3 117 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 HSPB2A8KAH6 182 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 NPIPB11E5RHQ5 1161 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 KLKB1P03952 638 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 POU1F1P28069 291 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 PTGER1P34995 402 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 AVPR1AP37288 418 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 CTCFP49711 727 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-210ENST00000482158 SELENOVP59797 346 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 RPL7AP62424 266 aaKnown RBP5.98□□□□□ -1.45
SF3B1-210ENST00000482158 TMEM115Q12893 351 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-210ENST00000482158 GRIK3Q13003 919 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 HSPB2Q16082 182 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 PLEKHO1Q53GL0 409 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-210ENST00000482158 HEPHL1Q6MZM0 1159 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 LRRC8EQ6NSJ5 796 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 C11orf87Q6NUJ2 197 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 CDC73Q6P1J9 531 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 CLEC4GQ6UXB4 293 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 TBC1D26Q86UD7 250 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 NGEFQ8N5V2 710 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 NRACQ8N912 160 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 TEX45Q8NA69 505 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 ETNPPLQ8TBG4 499 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 BICD2Q8TD16 824 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 CREB3L4Q8TEY5 395 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 RNF183Q96D59 192 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 TMEM79Q9BSE2 394 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 MSTO1Q9BUK6 570 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 NPFFR1Q9GZQ6 430 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 TASP1Q9H6P5 420 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 FZD3Q9NPG1 666 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 TBC1D22BQ9NU19 505 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 DECR2Q9NUI1 292 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 ZNF70Q9UC06 446 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-210ENST00000482158 MKLN1Q9UL63 735 aa5.98□□□□□ -1.45
SF3B1-210ENST00000482158 SCINQ9Y6U3 715 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms