RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 HCN2Q9UL51 889 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 TRIM64CA6NLI5 447 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 TTC34A8MYJ7 566 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 WASH3PC4AMC7 463 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 NPC1O15118 1278 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 OPA1O60313 960 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 RNF40O75150 1001 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 CHRNA3P32297 505 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 COILP38432 576 aaPredicted RBP11.76□□□□□ -0.53
HPS4-212ENST00000481910 GDF10P55107 478 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 RHOAP61586 193 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 IFI35P80217 286 aaPredicted RBP11.76□□□□□ -0.53
HPS4-212ENST00000481910 MRPS21P82921 87 aaKnown RBP11.76□□□□□ -0.53
HPS4-212ENST00000481910 ZBTB17Q13105 803 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 ZNF235Q14590 738 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 CYTH1Q15438 398 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 TEX44Q53QW1 395 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 SDE2Q6IQ49 451 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 TTC27Q6P3X3 843 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 KLHL7Q8IXQ5 586 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 ZNF366Q8N895 744 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 FAM71DQ8N9W8 422 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 KDM1BQ8NB78 822 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 TSEN2Q8NCE0 465 aaKnown RBP11.76□□□□□ -0.53
HPS4-212ENST00000481910 MAML1Q92585 1016 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 GLMNQ92990 594 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 VAT1Q99536 393 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 CACNA2D2Q9NY47 1150 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 SEPT3Q9UH03 358 aa11.76□□□□□ -0.53
HPS4-212ENST00000481910 RNF103O00237 685 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 ATP9BO43861 1147 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 BNIP3LO60238 219 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 ZNF189O75820 626 aaPredicted RBP11.75□□□□□ -0.53
HPS4-212ENST00000481910 IFNB1P01574 187 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 HLA-EP13747 358 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 PTPN3P26045 913 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 IL12RB1P42701 662 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 WASP42768 502 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 NRLP54845 237 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 LMNB2Q03252 620 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 ITKQ08881 620 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 WASHC5Q12768 1159 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 LRRC32Q14392 662 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 TRIM67Q6ZTA4 783 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 PID1Q7Z2X4 250 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 SPATS2Q86XZ4 545 aaKnown RBP11.75□□□□□ -0.53
HPS4-212ENST00000481910 ZNF687Q8N1G0 1237 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 SYNPOQ8N3V7 929 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 TEX26Q8N6G2 289 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 ALLCQ8N6M5 410 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 IL17RCQ8NAC3 791 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 FLCNQ8NFG4 579 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 RPLP0P6Q8NHW5 317 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 MPP4Q96JB8 637 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 PSKH2Q96QS6 385 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 IL12RB2Q99665 862 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 TNKS2Q9H2K2 1166 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 TMEM245Q9H330 911 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 NT5MQ9NPB1 228 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 WDR37Q9Y2I8 494 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 SIT1Q9Y3P8 196 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 TTLL3Q9Y4R7 772 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 IKBKGQ9Y6K9 419 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 STON1Q9Y6Q2 735 aa11.75□□□□□ -0.53
HPS4-212ENST00000481910 KLF8O95600 359 aaPredicted RBP11.74□□□□□ -0.53
HPS4-212ENST00000481910 EPHX1P07099 455 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 NTSR1P30989 418 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 FNTAP49354 379 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 C2orf54Q08AI8 447 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 FZD5Q13467 585 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 C22orf39Q6P5X5 142 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 MICALCLQ6ZW33 695 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 ZNF572Q7Z3I7 529 aaPredicted RBP11.74□□□□□ -0.53
HPS4-212ENST00000481910 TRMT11Q7Z4G4 463 aaKnown RBP11.74□□□□□ -0.53
HPS4-212ENST00000481910 PCGF5Q86SE9 256 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 ZNF567Q8N184 647 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.74□□□□□ -0.53
HPS4-212ENST00000481910 CNTD1Q8N815 330 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 CCDC89Q8N998 374 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 PJA1Q8NG27 643 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 FRS2Q8WU20 508 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 PTPRN2Q92932 1015 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 ISG20Q96AZ6 181 aaKnown RBP11.74□□□□□ -0.53
HPS4-212ENST00000481910 ZNF419Q96HQ0 510 aaPredicted RBP11.74□□□□□ -0.53
HPS4-212ENST00000481910 EXOC2Q96KP1 924 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 TM6SF2Q9BZW4 377 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 CEP44Q9C0F1 390 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 MTG2Q9H4K7 406 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 HAUS2Q9NVX0 235 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 KLHL8Q9P2G9 620 aaPredicted RBP11.74□□□□□ -0.53
HPS4-212ENST00000481910 KLHL42Q9P2K6 505 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 MCM8Q9UJA3 840 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.74□□□□□ -0.53
HPS4-212ENST00000481910 CTAGE15A4D2H0 777 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 ZNF821O75541 412 aaPredicted RBP11.74□□□□□ -0.53
HPS4-212ENST00000481910 HLA-DQB2P05538 268 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 CTAGE8P0CG41 777 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 PRKCHP24723 683 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 ACTN2P35609 894 aa11.74□□□□□ -0.53
HPS4-212ENST00000481910 RECQLP46063 649 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms