RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 ANKRD36A6QL64 1941 aa12.32□□□□□ -0.44
SQSTM1-207ENST00000481335 A0A087WV48 116 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 SPTY2D1-AS1A0A0U1RR47 76 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 A0A1W2PQC6 194 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 FAM170AA1A519 330 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 RNF103O00237 685 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 KRIT1O00522 736 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 AREL1O15033 823 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 BUB1O43683 1085 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 TMCC1O94876 653 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 GJB6O95452 261 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 CSF2P04141 144 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 GZMAP12544 262 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 ATP1A3P13637 1013 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 NME1P15531 152 aaKnown RBP12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 DUSP3P51452 185 aaPredicted RBP12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 RPL7AP62424 266 aaKnown RBP12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 SERINC3Q13530 473 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 MYLK3Q32MK0 819 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 FILIP1LQ4L180 1135 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 CCDC157Q569K6 752 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 GDPD4Q6W3E5 623 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 Q6ZSR6 202 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 IRF2BP2Q7Z5L9 587 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 PHLDB2Q86SQ0 1253 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 PSTKQ8IV42 348 aaKnown RBP12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 SLC25A45Q8N413 288 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 RYBPQ8N488 228 aaPredicted RBP12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 AOPEPQ8N6M6 819 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 BTN2A2Q8WVV5 523 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 MYOCQ99972 504 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 FZD3Q9NPG1 666 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 RTN4Q9NQC3 1192 aaKnown RBP12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 CA5BQ9Y2D0 317 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 CSNK1G3Q9Y6M4 447 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 LRRK1Q38SD2 2015 aa12.31□□□□□ -0.44
SQSTM1-207ENST00000481335 RASA4BC9J798 803 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 NEMP1O14524 444 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 SCAMP1O15126 338 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 RASA4O43374 803 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 SIGLEC6O43699 453 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 SDC3O75056 442 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 PAK4O96013 591 aaPredicted RBP12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 UGT2B4P06133 528 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 CKMT1AP12532 417 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 TNFAIP3P21580 790 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 PRKCIP41743 596 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 ABL2P42684 1182 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 NDST2P52849 883 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 TPI1P60174 286 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 PFN3P60673 137 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 RHOAP61586 193 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 YPEL5P62699 121 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 DAB2P98082 770 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 CYP4F3Q08477 520 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 ELP6Q0PNE2 266 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 MAPK8IP2Q13387 824 aaPredicted RBP12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 PTK2BQ14289 1009 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 FGL2Q14314 439 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 RTP5Q14D33 572 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 PLEKHA7Q6IQ23 1121 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 SCYL2Q6P3W7 929 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 TMC6Q7Z403 805 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 ZNF354CQ86Y25 554 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 DNAAF5Q86Y56 855 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 BAP1Q92560 729 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 KLK6Q92876 244 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 VOPP1Q96AW1 172 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 TRIM11Q96F44 468 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 BMFQ96LC9 184 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 KLF6Q99612 283 aaPredicted RBP12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 EDEM3Q9BZQ6 932 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 NOL6Q9H6R4 1146 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 AIPL1Q9NZN9 384 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 CLCA2Q9UQC9 943 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 SCINQ9Y6U3 715 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 ATRXP46100 2492 aa12.3□□□□□ -0.44
SQSTM1-207ENST00000481335 LOC400499M0QZD8 3231 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 TSPAN11A1L157 253 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 FAM149AA5PLN7 773 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 POM121BA6NF01 834 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 TRIM38O00635 465 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 TPP1O14773 563 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 CREB3O43889 395 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 LZTS3O60299 673 aaPredicted RBP12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 TM7SF2O76062 418 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 RNF8O76064 485 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 CLDN2P57739 230 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 MAMLD1Q13495 774 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 FZD2Q14332 565 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 ANO6Q4KMQ2 910 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 ZCCHC8Q6NZY4 707 aaKnown RBP12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 PYROXD2Q8N2H3 581 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 DCBLD1Q8N8Z6 715 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 OR6K2Q8NGY2 324 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 CXorf40AQ8TE69 158 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 HMCESQ96FZ2 354 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 KLHL32Q96NJ5 620 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 TUBGCP5Q96RT8 1024 aa12.29□□□□□ -0.44
SQSTM1-207ENST00000481335 LRRC19Q9H756 370 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms