RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 GEMIN4P57678 1058 aaKnown RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 YBEYP58557 167 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 APBA1Q02410 837 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 CCDC15Q0P6D6 951 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 SEMA3BQ13214 749 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 AUHQ13825 339 aaKnown RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 COL9A2Q14055 689 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 STARD3Q14849 445 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 ELF2Q15723 593 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 CSRP2Q16527 193 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 ASTE1Q2TB18 679 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 PLEKHG6Q3KR16 790 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 FAM102AQ5T9C2 384 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 SFMBT2Q5VUG0 894 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 NAA35Q5VZE5 725 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 PMS2CLQ68D20 193 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 OR6B2Q6IFH4 312 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 FBXL22Q6P050 247 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 LRRC31Q6UY01 552 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 TMPRSS7Q7RTY8 843 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 KBTBD6Q86V97 674 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 CREBRFQ8IUR6 639 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 MFN1Q8IWA4 741 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 MCOLN2Q8IZK6 566 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 LZTR1Q8N653 840 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 DCAF4L2Q8NA75 395 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 TXNDC5Q8NBS9 432 aaKnown RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 OR2T3Q8NH03 318 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 BAHD1Q8TBE0 780 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 HCAR2Q8TDS4 363 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 CLEC4CQ8WTT0 213 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 DDI1Q8WTU0 396 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 DNASE2BQ8WZ79 361 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 WBP2Q969T9 261 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 ISG20Q96AZ6 181 aaKnown RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 ZNF419Q96HQ0 510 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 LRIG1Q96JA1 1093 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 SEC16BQ96JE7 1060 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 MRGPRX1Q96LB2 322 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 PRICKLE1Q96MT3 831 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 PCDHB18PQ96TA0 734 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 ACP6Q9NPH0 428 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 ITM2CQ9NQX7 267 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 RBM12Q9NTZ6 932 aaKnown RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 DDIT4Q9NX09 232 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 DLL3Q9NYJ7 618 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 RCOR3Q9P2K3 495 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 ZNF212Q9UDV6 495 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 SFMBT1Q9UHJ3 866 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 RAB23Q9ULC3 237 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 INTUQ9ULD6 942 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 FZD4Q9ULV1 537 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 NENFQ9UMX5 172 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 PLA2G4CQ9UP65 541 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 SMG5Q9UPR3 1016 aaKnown RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 OR51B4Q9Y5P0 310 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 ZNF292O60281 2723 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 OTOGLQ3ZCN5 2332 aa5.03□□□□□ -1.6
PTCD3-213ENST00000480102 NUP210Q8TEM1 1887 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-213ENST00000480102 RIF1Q5UIP0 2472 aaKnown RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 TRIP11Q15643 1979 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 PTPRDP23468 1912 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 TMEM191CA6NGB0 347 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 SLC22A31A6NKX4 558 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 LRRC53A6NM62 1247 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 AP5Z1O43299 807 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 MSI1O43347 362 aaKnown RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 SYNCRIPO60506 623 aaKnown RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 MTA2O94776 668 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 KLF8O95600 359 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 GYPCP04921 128 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 IRF1P10914 325 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 HOXB2P14652 356 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 PDGFRAP16234 1089 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 ATF4P18848 351 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 POLR2EP19388 210 aaKnown RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 TACR2P21452 398 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 SLC6A4P31645 630 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 MAN1A1P33908 653 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 RFC1P35251 1148 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 NNMTP40261 264 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 SLC6A11P48066 632 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 HADHBP55084 474 aaKnown RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 HDAC4P56524 1084 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 KRT83P78385 493 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 ECT2LQ008S8 904 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 DEUP1Q05D60 604 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 KLHL30Q0D2K2 578 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 MESP2Q0VG99 397 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 ZNF177Q13360 481 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 MAMLD1Q13495 774 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 CDH18Q13634 790 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 PIGHQ14442 188 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 ELAVL3Q14576 367 aaKnown RBP5.02□□□□□ -1.61
PTCD3-213ENST00000480102 ZNF234Q14588 700 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 TAF5Q15542 800 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 SLC18A3Q16572 532 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 GEN1Q17RS7 908 aa5.02□□□□□ -1.61
PTCD3-213ENST00000480102 PLK5Q496M5 336 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms