RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 AGBL4Q5VU57 503 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 LYSMD4Q5XG99 296 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 NPNTQ6UXI9 565 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 GDPD4Q6W3E5 623 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 SRLQ86TD4 932 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 OR2T34Q8NGX1 318 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 OR6K2Q8NGY2 324 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 OR14C36Q8NHC7 312 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 HCAR2Q8TDS4 363 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 RUBCNQ92622 972 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 VOPP1Q96AW1 172 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 ARRDC3Q96B67 414 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 ZNF641Q96N77 438 aaPredicted RBP10.97□□□□□ -0.65
ATG4B-219ENST00000479941 KLHL32Q96NJ5 620 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 TUBGCP5Q96RT8 1024 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 LGMNQ99538 433 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 MGME1Q9BQP7 344 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 HEMGNQ9BXL5 484 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 ATP13A3Q9H7F0 1226 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 NCDNQ9UBB6 729 aa10.97□□□□□ -0.65
ATG4B-219ENST00000479941 TPX2Q9ULW0 747 aaKnown RBP10.97□□□□□ -0.65
ATG4B-219ENST00000479941 PTPRZ1P23471 2315 aaPredicted RBP10.97□□□□□ -0.65
ATG4B-219ENST00000479941 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.96□□□□□ -0.65
ATG4B-219ENST00000479941 GOLGA6L9A6NEM1 432 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 C16orf96A6NNT2 1141 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 METTL12A8MUP2 240 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 RNF103O00237 685 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 MUSKO15146 869 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 INSIG1O15503 277 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 PLRG1O43660 514 aaKnown RBP10.96□□□□□ -0.65
ATG4B-219ENST00000479941 LRP3O75074 770 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 CCNB1P14635 433 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 PECAM1P16284 738 aaPredicted RBP10.96□□□□□ -0.65
ATG4B-219ENST00000479941 CR2P20023 1033 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 CES1P23141 567 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 SERPINA4P29622 427 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 PTGER3P43115 390 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 RGRP47804 291 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 NEK3P51956 506 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 ADPRHP54922 357 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 BCL2L1Q07817 233 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 AP1B1Q10567 949 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 POM121L1PQ3SYA9 428 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 WDR45BQ5MNZ6 344 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 PIP5KL1Q5T9C9 394 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 FBXL19Q6PCT2 694 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 ASCL5Q7RTU5 278 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 CYP2U1Q7Z449 544 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 SLC41A1Q8IVJ1 513 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 REXO1L1PQ8IX06 675 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 RAB7BQ96AH8 199 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 HSPA12BQ96MM6 686 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 NUDCD1Q96RS6 583 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 POLR1EQ9GZS1 481 aaKnown RBP10.96□□□□□ -0.65
ATG4B-219ENST00000479941 CARD9Q9H257 536 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 SUV39H2Q9H5I1 410 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 C6orf106Q9H6K1 298 aaPredicted RBP10.96□□□□□ -0.65
ATG4B-219ENST00000479941 NT5MQ9NPB1 228 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 RBM22Q9NW64 420 aaKnown RBP eCLIP10.96□□□□□ -0.652e-6■□□□□ 10.6
ATG4B-219ENST00000479941 SAE1Q9UBE0 346 aaPredicted RBP10.96□□□□□ -0.65
ATG4B-219ENST00000479941 DKK3Q9UBP4 350 aa10.96□□□□□ -0.65
ATG4B-219ENST00000479941 LAMA1P25391 3075 aa10.96□□□□□ -0.66
ATG4B-219ENST00000479941 NUMA1Q14980 2115 aa10.96□□□□□ -0.66
ATG4B-219ENST00000479941 THADAQ6YHU6 1953 aa10.96□□□□□ -0.66
ATG4B-219ENST00000479941 TBC1D3DA0A087WVF3 549 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 TBC1D3IA0A087WXS9 549 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 TBC1D3EA0A087X179 549 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 TBC1D3KA0A087X1G2 549 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 BCLAF3A2AJT9 711 aaKnown RBP10.95□□□□□ -0.66
ATG4B-219ENST00000479941 TBC1D3FA6NER0 549 aaPredicted RBP10.95□□□□□ -0.66
ATG4B-219ENST00000479941 FAM47DPA6NHR8 397 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 MEI4A8MW99 385 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 HACD1B0YJ81 288 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 TBC1D3LB9A6J9 549 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 PLK4O00444 970 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 MTSS1O43312 755 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 GFRA3O60609 400 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 JCHAINP01591 159 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 TBC1D3HP0C7X1 549 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 ADRB3P13945 408 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 MSNP26038 577 aaKnown RBP10.95□□□□□ -0.66
ATG4B-219ENST00000479941 HOXD12P35452 270 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 SUOXP51687 545 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 IFI35P80217 286 aaPredicted RBP10.95□□□□□ -0.66
ATG4B-219ENST00000479941 CREB5Q02930 508 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 ITKQ08881 620 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 ZNF211Q13398 564 aaPredicted RBP10.95□□□□□ -0.66
ATG4B-219ENST00000479941 XRCC4Q13426 336 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 NOMO1Q15155 1222 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 CFAP58Q5T655 872 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 SEL1L2Q5TEA6 688 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 DCAF12L1Q5VU92 463 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 TBC1D3GQ6DHY5 549 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 ALG1LQ6GMV1 187 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 TBC1D3CQ6IPX1 549 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 NEK5Q6P3R8 708 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 NCEH1Q6PIU2 408 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 BRAT1Q6PJG6 821 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 PARS2Q7L3T8 475 aaKnown RBP10.95□□□□□ -0.66
ATG4B-219ENST00000479941 ARMCX6Q7L4S7 300 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms