RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 TRMT13Q9NUP7 481 aaKnown RBP10.93□□□□□ -0.66
VPS52-217ENST00000478934 ARHGEF38Q9NXL2 777 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 GABRQQ9UN88 632 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 GIT1Q9Y2X7 761 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 KCTD3Q9Y597 815 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 MTSS1O43312 755 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 OR6B1O95007 311 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 FESP07332 822 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 XRCC1P18887 633 aaPredicted RBP10.93□□□□□ -0.66
VPS52-217ENST00000478934 CCNCP24863 283 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 ADRA1AP35348 466 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 THOP1P52888 689 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 MGAT3Q09327 533 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 RASIP1Q5U651 963 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 C17orf99Q6UX52 265 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 SERINC5Q86VE9 423 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 STYXQ8WUJ0 223 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 ZIC5Q96T25 663 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 VAT1Q99536 393 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 IL12RB2Q99665 862 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 MTG1Q9BT17 334 aaPredicted RBP10.93□□□□□ -0.66
VPS52-217ENST00000478934 FSD1LQ9BXM9 530 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 OSBPL2Q9H1P3 480 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 STN1Q9H668 368 aaKnown RBP10.93□□□□□ -0.66
VPS52-217ENST00000478934 GPAMQ9HCL2 828 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 ARHGAP26Q9UNA1 814 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 ACOT9Q9Y305 439 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 RAD54BQ9Y620 910 aa10.93□□□□□ -0.66
VPS52-217ENST00000478934 MKI67P46013 3256 aaKnown RBP10.93□□□□□ -0.66
VPS52-217ENST00000478934 E9PAM4 449 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 TNFRSF10BO14763 440 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 MATN3O15232 486 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 HDAC3O15379 428 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 CACNG3O60359 315 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 HMBSP08397 361 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 AKR1A1P14550 325 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 RGS2P41220 211 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 BTKQ06187 659 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 SLC10A7Q0GE19 358 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 SLC12A1Q13621 1099 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 CSHL1Q14406 222 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 LPIN1Q14693 890 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 MMEL1Q495T6 779 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 ALFQ53S48 1182 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 PIK3R6Q5UE93 754 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 SEL1L3Q68CR1 1132 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 METTL23Q86XA0 190 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 FCRL5Q96RD9 977 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 NPAS2Q99743 824 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 KLHL4Q9C0H6 718 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 NT5MQ9NPB1 228 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 RAP2CQ9Y3L5 183 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 TCAF1Q9Y4C2 921 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 ANKRD12Q6UB98 2062 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 TMEM114B3SHH9 223 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 DDHD2O94830 711 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 CCR1P32246 355 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 RPL9P32969 192 aaKnown RBP10.92□□□□□ -0.66
VPS52-217ENST00000478934 ETFBP38117 255 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 WNT3AP56704 352 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 RAB10P61026 200 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 MS4A2Q01362 244 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 CAP1Q01518 475 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 MANEALQ5VSG8 457 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 PAOXQ6QHF9 649 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 ZNF354CQ86Y25 554 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 SPATA2LQ8IUW3 424 aaPredicted RBP10.92□□□□□ -0.66
VPS52-217ENST00000478934 ANKRD49Q8WVL7 239 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 TRIB2Q92519 343 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 PPP2R3CQ969Q6 453 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 PABPC5Q96DU9 382 aaKnown RBP10.92□□□□□ -0.66
VPS52-217ENST00000478934 TMA16Q96EY4 203 aaKnown RBP10.92□□□□□ -0.66
VPS52-217ENST00000478934 MYEOVQ96EZ4 313 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 TSGA13Q96PP4 275 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 IPO11Q9UI26 975 aaKnown RBP10.92□□□□□ -0.66
VPS52-217ENST00000478934 AAR2Q9Y312 384 aaKnown RBP10.92□□□□□ -0.66
VPS52-217ENST00000478934 ACTL7AQ9Y615 435 aa10.92□□□□□ -0.66
VPS52-217ENST00000478934 DUSP11O75319 330 aaKnown RBP10.91□□□□□ -0.66
VPS52-217ENST00000478934 ATP5BP06576 529 aaKnown RBP10.91□□□□□ -0.66
VPS52-217ENST00000478934 FAM163BP0C2L3 166 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 STMN1P16949 149 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 VCLP18206 1134 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 CD86P42081 329 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 KCNC1P48547 511 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 MTTPP55157 894 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 DSC2Q02487 901 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 MED21Q13503 144 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 PPP1R3AQ16821 1122 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 SH2D4BQ5SQS7 431 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 RANBP10Q6VN20 620 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 MRPL10Q7Z7H8 261 aaKnown RBP10.91□□□□□ -0.66
VPS52-217ENST00000478934 SDCCAG8Q86SQ7 713 aaPredicted RBP10.91□□□□□ -0.66
VPS52-217ENST00000478934 LINC00523Q86TU6 105 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 SATL1Q86VE3 508 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 DSELQ8IZU8 1212 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 PPHLN1Q8NEY8 458 aaKnown RBP10.91□□□□□ -0.66
VPS52-217ENST00000478934 IRGQQ8WZA9 623 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 PHF21BQ96EK2 531 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 HMCESQ96FZ2 354 aa10.91□□□□□ -0.66
VPS52-217ENST00000478934 POMKQ9H5K3 350 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms