RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 RXFP2Q8WXD0 754 aa13.19□□□□□ -0.3
ABCF3-212ENST00000478288 TBC1D31Q96DN5 1066 aa13.19□□□□□ -0.3
ABCF3-212ENST00000478288 LGMNQ99538 433 aa13.19□□□□□ -0.3
ABCF3-212ENST00000478288 C1QTNF7Q9BXJ2 289 aa13.19□□□□□ -0.3
ABCF3-212ENST00000478288 TM6SF2Q9BZW4 377 aa13.19□□□□□ -0.3
ABCF3-212ENST00000478288 ABCG4Q9H172 646 aa13.19□□□□□ -0.3
ABCF3-212ENST00000478288 GANQ9H2C0 597 aa13.19□□□□□ -0.3
ABCF3-212ENST00000478288 POLR1BQ9H9Y6 1135 aa13.19□□□□□ -0.3
ABCF3-212ENST00000478288 SAMSN1Q9NSI8 373 aaKnown RBP13.19□□□□□ -0.3
ABCF3-212ENST00000478288 NDFIP2Q9NV92 336 aa13.19□□□□□ -0.3
ABCF3-212ENST00000478288 RAI2Q9Y5P3 530 aa13.19□□□□□ -0.3
ABCF3-212ENST00000478288 TLN1Q9Y490 2541 aaKnown RBP13.19□□□□□ -0.3
ABCF3-212ENST00000478288 BOD1L1Q8NFC6 3051 aa13.19□□□□□ -0.3
ABCF3-212ENST00000478288 LRP4O75096 1905 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 EME2A4GXA9 379 aaPredicted RBP13.18□□□□□ -0.3
ABCF3-212ENST00000478288 IGLON5A6NGN9 336 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 PES1O00541 588 aaKnown RBP13.18□□□□□ -0.3
ABCF3-212ENST00000478288 SPINT1O43278 529 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 USP12O75317 370 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 TCEA3O75764 348 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 NEBLO76041 1014 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 LRIG2O94898 1065 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 JUNDP17535 347 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 SUOXP51687 545 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 HDAC4P56524 1084 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 JAM2P57087 298 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 YPEL5P62699 121 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 GABREP78334 506 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 FMO1Q01740 532 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 C15orf59Q2T9L4 293 aaPredicted RBP13.18□□□□□ -0.3
ABCF3-212ENST00000478288 MYLK3Q32MK0 819 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 INO80DQ53TQ3 878 aaPredicted RBP13.18□□□□□ -0.3
ABCF3-212ENST00000478288 ZNF542PQ5EBM4 170 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 RWDD4Q6NW29 188 aaKnown RBP13.18□□□□□ -0.3
ABCF3-212ENST00000478288 WDR48Q8TAF3 677 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 CENPTQ96BT3 561 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 GDAP1L1Q96MZ0 367 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 BOCQ9BWV1 1114 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 ASCL3Q9NQ33 180 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 THSD1Q9NS62 852 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 SPASTQ9UBP0 616 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 DKK3Q9UBP4 350 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 KLF15Q9UIH9 416 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 MFHAS1Q9Y4C4 1052 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 PCDHGA8Q9Y5G5 932 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 ACTL7AQ9Y615 435 aa13.18□□□□□ -0.3
ABCF3-212ENST00000478288 CAPN8A6NHC0 703 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 LMO7DNF2Z398 122 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 ERVH48-1M5A8F1 160 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 NEMP1O14524 444 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 KDELR3O43731 214 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 C1QL1O75973 258 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 MPOP05164 745 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 UGT2B4P06133 528 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 PLEKP08567 350 aaPredicted RBP13.17□□□□□ -0.3
ABCF3-212ENST00000478288 UNGP13051 313 aaPredicted RBP13.17□□□□□ -0.3
ABCF3-212ENST00000478288 CHRNB2P17787 502 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 SOX5P35711 763 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 MLLT3P42568 568 aaPredicted RBP13.17□□□□□ -0.3
ABCF3-212ENST00000478288 RPIAP49247 311 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 TMPRSS3P57727 454 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 CCDC173Q0VFZ6 552 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 PTP4A2Q12974 167 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 EIF2B5Q13144 721 aaKnown RBP13.17□□□□□ -0.3
ABCF3-212ENST00000478288 CDO1Q16878 200 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 ISXQ2M1V0 245 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 HSP90AA4PQ58FG1 418 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 BROXQ5VW32 411 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 MACC1Q6ZN28 852 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 RYBPQ8N488 228 aaPredicted RBP13.17□□□□□ -0.3
ABCF3-212ENST00000478288 OR6K2Q8NGY2 324 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 SLC20A1Q8WUM9 679 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 SNRNP27Q8WVK2 155 aaKnown RBP13.17□□□□□ -0.3
ABCF3-212ENST00000478288 GLMNQ92990 594 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 NAT6Q93015 286 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 WBP1Q96G27 269 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 IL12RB2Q99665 862 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 DPH1Q9BZG8 443 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 NUP62CLQ9H1M0 184 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 APOBEC3BQ9UH17 382 aaKnown RBP13.17□□□□□ -0.3
ABCF3-212ENST00000478288 IPO11Q9UI26 975 aaKnown RBP13.17□□□□□ -0.3
ABCF3-212ENST00000478288 DNAI1Q9UI46 699 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 SSUH2Q9Y2M2 353 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 ANKRD36A6QL64 1941 aa13.17□□□□□ -0.3
ABCF3-212ENST00000478288 ARHGEF17Q96PE2 2063 aaPredicted RBP13.16□□□□□ -0.3
ABCF3-212ENST00000478288 FAM72CH0Y354 149 aa13.16□□□□□ -0.3
ABCF3-212ENST00000478288 KRIT1O00522 736 aa13.16□□□□□ -0.3
ABCF3-212ENST00000478288 GFPT2O94808 682 aa13.16□□□□□ -0.3
ABCF3-212ENST00000478288 TMCC1O94876 653 aa13.16□□□□□ -0.3
ABCF3-212ENST00000478288 IGSF6O95976 241 aa13.16□□□□□ -0.3
ABCF3-212ENST00000478288 KRT3P12035 628 aa13.16□□□□□ -0.3
ABCF3-212ENST00000478288 TGM2P21980 687 aa13.16□□□□□ -0.3
ABCF3-212ENST00000478288 GKP32189 559 aa13.16□□□□□ -0.3
ABCF3-212ENST00000478288 NSFP46459 744 aaKnown RBP13.16□□□□□ -0.3
ABCF3-212ENST00000478288 THOP1P52888 689 aa13.16□□□□□ -0.3
ABCF3-212ENST00000478288 AIF1P55008 147 aa13.16□□□□□ -0.3
ABCF3-212ENST00000478288 YBEYP58557 167 aaPredicted RBP13.16□□□□□ -0.3
ABCF3-212ENST00000478288 SKOR1P84550 965 aa13.16□□□□□ -0.3
ABCF3-212ENST00000478288 RAD51Q06609 339 aa13.16□□□□□ -0.3
ABCF3-212ENST00000478288 NR0B2Q15466 257 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms