RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 TREHO43280 583 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 TGDSO95455 350 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 LINC00032P0C843 101 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 PRSS56P0CW18 603 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 MAGP20916 626 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 PTPN3P26045 913 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 CCR1P32246 355 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 ACADSBP45954 432 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 SCNN1GP51170 649 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 TTC33Q6PID6 262 aaPredicted RBP9.87□□□□□ -0.83
CMC1-209ENST00000477739 CYP4V2Q6ZWL3 525 aaPredicted RBP9.87□□□□□ -0.83
CMC1-209ENST00000477739 USP50Q70EL3 339 aaPredicted RBP9.87□□□□□ -0.83
CMC1-209ENST00000477739 PDZD4Q76G19 769 aaPredicted RBP9.87□□□□□ -0.83
CMC1-209ENST00000477739 LPGAT1Q92604 370 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 GATA6Q92908 595 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 VPS33AQ96AX1 596 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 SNX27Q96L92 541 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 FRMD8Q9BZ67 464 aaPredicted RBP9.87□□□□□ -0.83
CMC1-209ENST00000477739 EXD2Q9NVH0 621 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 UBAP1Q9NZ09 502 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 BCLAF3A2AJT9 711 aaKnown RBP9.87□□□□□ -0.83
CMC1-209ENST00000477739 MRASO14807 208 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 HDAC3O15379 428 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 TADA2AO75478 443 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 LRIG2O94898 1065 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 FAM58BPP0C7Q3 252 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 GRK2P25098 689 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 LRPAP1P30533 357 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 STT3AP46977 705 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 PSME3P61289 254 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 LBRQ14739 615 aaKnown RBP9.87□□□□□ -0.83
CMC1-209ENST00000477739 SV2CQ496J9 727 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 LRRC8BQ6P9F7 803 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 TMEM110Q86TL2 294 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 UNC93AQ86WB7 457 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 PDSS2Q86YH6 399 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 CEP97Q8IW35 865 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 MAGEE2Q8TD90 523 aaPredicted RBP9.87□□□□□ -0.83
CMC1-209ENST00000477739 RMDN1Q96DB5 314 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 MAML3Q96JK9 1138 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 SMIM14Q96QK8 99 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 NUMA1Q14980 2115 aa9.87□□□□□ -0.83
CMC1-209ENST00000477739 A0A1W2PQ67 120 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 AXIN1O15169 862 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 UBDO15205 165 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 RTN3O95197 1032 aaPredicted RBP9.86□□□□□ -0.83
CMC1-209ENST00000477739 ZNF23P17027 643 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 PRKCHP24723 683 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 HOXA11P31270 313 aaPredicted RBP9.86□□□□□ -0.83
CMC1-209ENST00000477739 GPR158Q5T848 1215 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 C16orf89Q6UX73 402 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 TLK2Q86UE8 772 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 OSTM1Q86WC4 334 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 RALGPS2Q86X27 583 aaPredicted RBP9.86□□□□□ -0.83
CMC1-209ENST00000477739 ZDHHC17Q8IUH5 632 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 PSTKQ8IV42 348 aaKnown RBP9.86□□□□□ -0.83
CMC1-209ENST00000477739 LRRC52Q8N7C0 313 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 TMEM40Q8WWA1 233 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 THAP11Q96EK4 314 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 DHRS4Q9BTZ2 278 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 PAIP1Q9H074 479 aaKnown RBP9.86□□□□□ -0.83
CMC1-209ENST00000477739 FAM96AQ9H5X1 160 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 U3KQV3 271 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 MCM3APO60318 1980 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 CDH23Q9H251 3354 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 SUPT3HB4E1H0 165 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 TRAFD1O14545 582 aaPredicted RBP9.86□□□□□ -0.83
CMC1-209ENST00000477739 RNASEH2AO75792 299 aaKnown RBP9.86□□□□□ -0.83
CMC1-209ENST00000477739 AHSGP02765 367 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 DARSP14868 501 aaKnown RBP9.86□□□□□ -0.83
CMC1-209ENST00000477739 TBCELQ5QJ74 424 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 GPR107Q5VW38 600 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 KLHDC10Q6PID8 442 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 TRPC4APQ8TEL6 797 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 GTF3C2Q8WUA4 911 aaPredicted RBP9.86□□□□□ -0.83
CMC1-209ENST00000477739 ARNTL2Q8WYA1 636 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 QKIQ96PU8 341 aaKnown RBP eCLIP9.86□□□□□ -0.838e-14■■■■■ 42.3
CMC1-209ENST00000477739 TBCDQ9BTW9 1192 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 UPF3AQ9H1J1 476 aaKnown RBP9.86□□□□□ -0.83
CMC1-209ENST00000477739 BPIFA1Q9NP55 256 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 RBMX2Q9Y388 322 aaKnown RBP9.86□□□□□ -0.83
CMC1-209ENST00000477739 FER1L6Q2WGJ9 1857 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 NRCAMQ92823 1304 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 PTGES3LE9PB15 166 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 GNGT2O14610 69 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 DDHD2O94830 711 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 TBX18O95935 607 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 NFKBIAP25963 317 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 PCSK6P29122 969 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 ALDH4A1P30038 563 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 MATKP42679 507 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 PHEXP78562 749 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 GALNT3Q14435 633 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 MFSD10Q14728 455 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 MAPK11Q15759 364 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 ANKRD23Q86SG2 305 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 HERC6Q8IVU3 1022 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 CFAP52Q8N1V2 620 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 PSD4Q8NDX1 1056 aa9.86□□□□□ -0.83
CMC1-209ENST00000477739 HEXDCQ8WVB3 486 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms