RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ZFAND4Q86XD8 727 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 SDR16C5Q8N3Y7 309 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 WDTC1Q8N5D0 677 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 PCDH20Q8N6Y1 951 aaKnown RBP11.56□□□□□ -0.56
BRCA1-213ENST00000476777 ARL10Q8N8L6 244 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 KYQ8NBH2 561 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 OR7D4Q8NG98 312 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 HTR3CQ8WXA8 447 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 CPXM1Q96SM3 734 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 FUCA2Q9BTY2 467 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 ACP6Q9NPH0 428 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 MPP6Q9NZW5 540 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 GULP1Q9UBP9 304 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 ITM2BQ9Y287 266 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 LOXL2Q9Y4K0 774 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 SNX10Q9Y5X0 201 aa11.56□□□□□ -0.56
BRCA1-213ENST00000476777 LRRK1Q38SD2 2015 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 PRAMEF33A0A0G2JMD5 474 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 DRGXA6NNA5 263 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 C16orf96A6NNT2 1141 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 PRAMEF10O60809 474 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 ADCY5O95622 1261 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 ITIH1P19827 911 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 NOS2P35228 1153 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 IGFALSP35858 605 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 DNA2P51530 1060 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 PPARDQ03181 441 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 SLC20A2Q08357 652 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 PNOCQ13519 176 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 ARTNQ5T4W7 220 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 FAXCQ5TGI0 409 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 ZNF658Q5TYW1 1059 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-213ENST00000476777 RETSATQ6NUM9 610 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 LVRNQ6Q4G3 990 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 OLFML1Q6UWY5 402 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 MACC1Q6ZN28 852 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 TFAP2DQ7Z6R9 452 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 DTX1Q86Y01 620 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 ZSCAN1Q8NBB4 408 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 EHBP1Q8NDI1 1231 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 PCDH19Q8TAB3 1148 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 RAB7BQ96AH8 199 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 VOPP1Q96AW1 172 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 TMEM74Q96NL1 305 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 CPEB1Q9BZB8 566 aaKnown RBP11.55□□□□□ -0.56
BRCA1-213ENST00000476777 TKTL2Q9H0I9 626 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 LRRN3Q9H3W5 708 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 ZDHHC6Q9H6R6 413 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 PIGVQ9NUD9 493 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 ARHGEF38Q9NXL2 777 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 FOXJ2Q9P0K8 574 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 SIRPGQ9P1W8 387 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 ZNF212Q9UDV6 495 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 FCF1Q9Y324 198 aaKnown RBP11.55□□□□□ -0.56
BRCA1-213ENST00000476777 ZFC3H1O60293 1989 aaKnown RBP11.55□□□□□ -0.56
BRCA1-213ENST00000476777 SDK2Q58EX2 2172 aa11.55□□□□□ -0.56
BRCA1-213ENST00000476777 IGLV3-10A0A075B6K4 115 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 A0A1W2PQ27 194 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 A0A1W2PQ64 194 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 ILVBLA1L0T0 632 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 CLEC18AA5D8T8 446 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 M0QYT0 321 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 NEMP1O14524 444 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 THAP12O43422 761 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 DAB1O75553 588 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 CD160O95971 181 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 CR2P20023 1033 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 GNA15P30679 374 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 OR1E1P30953 314 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 GKP32189 559 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 EIF4A3P38919 411 aaKnown RBP11.54□□□□□ -0.56
BRCA1-213ENST00000476777 ETV5P41161 510 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 CXCR3P49682 368 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 YPEL5P62699 121 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 ARF5P84085 180 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 ZFP36L1Q07352 338 aaKnown RBP11.54□□□□□ -0.56
BRCA1-213ENST00000476777 MORC3Q14149 939 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 ELOCQ15369 112 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 ZNF805Q5CZA5 627 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 CLEC18BQ6UXF7 455 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 ZNF783Q6ZMS7 281 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 FAM183BPQ6ZVS7 135 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 VPS36Q86VN1 386 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 FSTL5Q8N475 847 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-213ENST00000476777 CLEC18CQ8NCF0 446 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 ZNF564Q8TBZ8 553 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-213ENST00000476777 SCG3Q8WXD2 468 aaKnown RBP11.54□□□□□ -0.56
BRCA1-213ENST00000476777 SNX21Q969T3 373 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 CEP63Q96MT8 703 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 SPON2Q9BUD6 331 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 GTPBP4Q9BZE4 634 aaKnown RBP11.54□□□□□ -0.56
BRCA1-213ENST00000476777 EPN3Q9H201 632 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 ADNPQ9H2P0 1102 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 WDCPQ9H6R7 721 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 MBNL1Q9NR56 388 aaKnown RBP11.54□□□□□ -0.56
BRCA1-213ENST00000476777 RMND1Q9NWS8 449 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 HECAQ9UBI9 543 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-213ENST00000476777 DOLKQ9UPQ8 538 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 ACTL7AQ9Y615 435 aa11.54□□□□□ -0.56
BRCA1-213ENST00000476777 LRBAP50851 2863 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms