RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 LRRK2Q5S007 2527 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 DAB1O75553 588 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 TFE3P19532 575 aaPredicted RBP16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 OR1E1P30953 314 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 YPEL5P62699 121 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 CYP4F2P78329 520 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 PPARDQ03181 441 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 UBAP2LQ14157 1087 aaKnown RBP16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 CLCA4Q14CN2 919 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 ARTNQ5T4W7 220 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 RETSATQ6NUM9 610 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 OLFML1Q6UWY5 402 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 MACC1Q6ZN28 852 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 C11orf57Q6ZUT1 292 aaPredicted RBP16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 VPS36Q86VN1 386 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 ZFAND4Q86XD8 727 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 PCDH19Q8TAB3 1148 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 HTR3CQ8WXA8 447 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 CCDC34Q96HJ3 373 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 TMEM74Q96NL1 305 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 GSDMAQ96QA5 445 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 FUCA2Q9BTY2 467 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 CPEB1Q9BZB8 566 aaKnown RBP16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 SLC25A18Q9H1K4 315 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 UBE2TQ9NPD8 197 aaPredicted RBP16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 GEMIN8Q9NWZ8 242 aaKnown RBP16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 HECAQ9UBI9 543 aaPredicted RBP16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 SEPT3Q9UH03 358 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 DOLKQ9UPQ8 538 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 LOXL2Q9Y4K0 774 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 ACTL7AQ9Y615 435 aa16.71■□□□□ 0.27
APOBEC3F-203ENST00000476513 PRAMEF33A0A0G2JMD5 474 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 ILVBLA1L0T0 632 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 PRAMEF10O60809 474 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 ITIH1P19827 911 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 GKP32189 559 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 NOS2P35228 1153 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 EIF4A3P38919 411 aaKnown RBP16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 CXCR3P49682 368 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 ARF5P84085 180 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 BRMS1LQ5PSV4 323 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 LVRNQ6Q4G3 990 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 LRRC31Q6UY01 552 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 SLC26A9Q7LBE3 791 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 FSTL5Q8N475 847 aaPredicted RBP16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 ZSCAN1Q8NBB4 408 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 OR6K2Q8NGY2 324 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 SCG3Q8WXD2 468 aaKnown RBP16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 TM6SF2Q9BZW4 377 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 LRRN3Q9H3W5 708 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 ATP13A1Q9HD20 1204 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 MBNL1Q9NR56 388 aaKnown RBP16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 TMPRSS4Q9NRS4 437 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 FOXJ2Q9P0K8 574 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 FLNCQ14315 2725 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 COL12A1Q99715 3063 aa16.7■□□□□ 0.26
APOBEC3F-203ENST00000476513 IGLV3-10A0A075B6K4 115 aa16.69■□□□□ 0.26
APOBEC3F-203ENST00000476513 AGRPO00253 132 aa16.69■□□□□ 0.26
APOBEC3F-203ENST00000476513 CD160O95971 181 aa16.69■□□□□ 0.26
APOBEC3F-203ENST00000476513 ERBB2P04626 1255 aa16.69■□□□□ 0.26
APOBEC3F-203ENST00000476513 GP1BBP13224 206 aa16.69■□□□□ 0.26
APOBEC3F-203ENST00000476513 ETV5P41161 510 aa16.69■□□□□ 0.26
APOBEC3F-203ENST00000476513 ELOCQ15369 112 aa16.69■□□□□ 0.26
APOBEC3F-203ENST00000476513 TCEA2Q15560 299 aa16.69■□□□□ 0.26
APOBEC3F-203ENST00000476513 ZNF805Q5CZA5 627 aa16.69■□□□□ 0.26
APOBEC3F-203ENST00000476513 ZNF783Q6ZMS7 281 aa16.69■□□□□ 0.26
APOBEC3F-203ENST00000476513 DTX1Q86Y01 620 aa16.69■□□□□ 0.26
APOBEC3F-203ENST00000476513 PASD1Q8IV76 773 aa16.69■□□□□ 0.26
APOBEC3F-203ENST00000476513 VOPP1Q96AW1 172 aa16.69■□□□□ 0.26
APOBEC3F-203ENST00000476513 C1orf74Q96LT6 269 aa16.69■□□□□ 0.26
APOBEC3F-203ENST00000476513 NPY6RQ99463 290 aa16.69■□□□□ 0.26
APOBEC3F-203ENST00000476513 ZNF212Q9UDV6 495 aa16.69■□□□□ 0.26
APOBEC3F-203ENST00000476513 GPR34Q9UPC5 381 aa16.69■□□□□ 0.26
APOBEC3F-203ENST00000476513 BSNQ9UPA5 3926 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 BECN2A8MW95 431 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 TOR1BO14657 336 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 PSMA7O14818 248 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 AREL1O15033 823 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 MMP20O60882 483 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 ALPIP09923 528 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 BLKP51451 505 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 HK3P52790 923 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 SLC6A3Q01959 620 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 ZFP36L1Q07352 338 aaKnown RBP16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 HSCBQ8IWL3 235 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 PLPP6Q8IY26 295 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 TP53I13Q8NBR0 393 aaPredicted RBP16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 ZNF397Q8NF99 534 aaPredicted RBP16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 SPATA20Q8TB22 786 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 USP7Q93009 1102 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 TSACCQ96A04 125 aaPredicted RBP16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 ARHGEF26Q96DR7 871 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 EDEM3Q9BZQ6 932 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 RRN3Q9NYV6 651 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 ZDHHC9Q9Y397 364 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 PCDHB11Q9Y5F2 797 aa16.68■□□□□ 0.26
APOBEC3F-203ENST00000476513 A0A1W2PQC6 194 aa16.67■□□□□ 0.26
APOBEC3F-203ENST00000476513 SRGAP2O75044 1071 aa16.67■□□□□ 0.26
APOBEC3F-203ENST00000476513 CD44P16070 742 aaKnown RBP16.67■□□□□ 0.26
APOBEC3F-203ENST00000476513 SULT1E1P49888 294 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms