RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 OBP2AQ9NY56 170 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 LHX3Q9UBR4 397 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 TBK1Q9UHD2 729 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 COL4A3Q01955 1670 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 LOC285095A0A1B0GVY8 99 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 INSIG1O15503 277 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 ALDH1A2O94788 518 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 CD160O95971 181 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 ADH1CP00326 375 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 FGF1P05230 155 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 HLA-DPA1P20036 260 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 HLA-FP30511 346 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 VIPR2P41587 438 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 CHRNA4P43681 627 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 SERPINH1P50454 418 aaKnown RBP13.89□□□□□ -0.19
TRAF4-210ENST00000475329 SCNN1BP51168 640 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 GYS2P54840 703 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 PPP2R2AP63151 447 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 SLC20A2Q08357 652 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 ADAM15Q13444 863 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 IHHQ14623 411 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 POU6F1Q14863 301 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 SLC1A5Q15758 541 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 ANKRD20A4Q4UJ75 823 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 RALGPS1Q5JS13 557 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 TRMT10BQ6PF06 316 aaKnown RBP13.89□□□□□ -0.19
TRAF4-210ENST00000475329 ADGRD1Q6QNK2 874 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 KDELC2Q7Z4H8 507 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 TMEM135Q86UB9 458 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 RASSF3Q86WH2 238 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 LRRC6Q86X45 466 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 CTAGE3PQ8IX95 158 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRAF4-210ENST00000475329 DCAKDQ8WVC6 231 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 OSCP1Q8WVF1 389 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 CDKL2Q92772 493 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 EXOC2Q96KP1 924 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 RANBP9Q96S59 729 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 PRO3102Q9H379 93 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 TRPV4Q9HBA0 871 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 NOD2Q9HC29 1040 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 MOCS1Q9NZB8 636 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 GGA2Q9UJY4 613 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 CDH7Q9ULB5 785 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 TCAF1Q9Y4C2 921 aa13.89□□□□□ -0.19
TRAF4-210ENST00000475329 GJB3O75712 270 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 NDST3O95803 873 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 EPOP01588 193 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 CYP17A1P05093 508 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 ATXN1LP0C7T5 689 aaKnown RBP13.88□□□□□ -0.19
TRAF4-210ENST00000475329 ADH5P11766 374 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 PABPC1P11940 636 aaKnown RBP13.88□□□□□ -0.19
TRAF4-210ENST00000475329 CA4P22748 312 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 ADRA1DP25100 572 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 CDK18Q07002 472 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 NSUN2Q08J23 767 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRAF4-210ENST00000475329 MGAT5Q09328 741 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 SEPT6Q14141 434 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 DHCR24Q15392 516 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 EML3Q32P44 896 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 FUT11Q495W5 492 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 SIRPB2Q5JXA9 342 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 EMC10Q5UCC4 262 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 CES5AQ6NT32 575 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 PKN3Q6P5Z2 889 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 CES3Q6UWW8 571 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 MARK2Q7KZI7 788 aaKnown RBP13.88□□□□□ -0.19
TRAF4-210ENST00000475329 SLC26A11Q86WA9 606 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 ADGRG2Q8IZP9 1017 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 CYP4X1Q8N118 509 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.88□□□□□ -0.192e-10■□□□□ 9.7
TRAF4-210ENST00000475329 CERS2Q96G23 380 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 FCRL3Q96P31 734 aaPredicted RBP13.88□□□□□ -0.19
TRAF4-210ENST00000475329 LRRC3BQ96PB8 259 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 PPANQ9NQ55 473 aaKnown RBP13.88□□□□□ -0.19
TRAF4-210ENST00000475329 SMYD2Q9NRG4 433 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 SENP1Q9P0U3 644 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 PRKAG3Q9UGI9 489 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 CDH22Q9UJ99 828 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 SLC25A13Q9UJS0 675 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 ZNF180Q9UJW8 692 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 INTS6Q9UL03 887 aaKnown RBP13.88□□□□□ -0.19
TRAF4-210ENST00000475329 FCF1Q9Y324 198 aaKnown RBP13.88□□□□□ -0.19
TRAF4-210ENST00000475329 FAM169AQ9Y6X4 670 aa13.88□□□□□ -0.19
TRAF4-210ENST00000475329 IQANK1A0A1B0GTG1 560 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 HEATR9A2RTY3 570 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 HEPACAM2A8MVW5 462 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 CXorf49A8MYA2 514 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-210ENST00000475329 HOXC11O43248 304 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-210ENST00000475329 PIAS1O75925 651 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 NFATC1O95644 943 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 KRT15P19012 456 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 NMBRP28336 390 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 AP1S1P61966 158 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 SULT2A1Q06520 285 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 ATAT1Q5SQI0 421 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 ASTLQ6HA08 431 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-210ENST00000475329 NCEH1Q6PIU2 408 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 SRLQ86TD4 932 aa13.87□□□□□ -0.19
TRAF4-210ENST00000475329 TRABD2AQ86V40 505 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms