RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 SMAD1Q15797 465 aaKnown RBP9.92□□□□□ -0.82
USP39-214ENST00000474572 SNCBQ16143 134 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 CNGA3Q16281 694 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 TRIM60Q495X7 471 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 HECTD3Q5T447 861 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 ZYG11AQ6WRX3 759 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 ZCCHC23Q6ZST2 131 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 CHST9Q7L1S5 443 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 CIR1Q86X95 450 aaPredicted RBP9.92□□□□□ -0.82
USP39-214ENST00000474572 WDR75Q8IWA0 830 aaKnown RBP9.92□□□□□ -0.82
USP39-214ENST00000474572 MFSD6LQ8IWD5 586 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 KIF2BQ8N4N8 673 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 ZNF461Q8TAF7 563 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 STYXQ8WUJ0 223 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 TOP1MTQ969P6 601 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 PABPC5Q96DU9 382 aaKnown RBP9.92□□□□□ -0.82
USP39-214ENST00000474572 PRR11Q96HE9 360 aaPredicted RBP9.92□□□□□ -0.82
USP39-214ENST00000474572 FEM1CQ96JP0 617 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 PRICKLE1Q96MT3 831 aaPredicted RBP9.92□□□□□ -0.82
USP39-214ENST00000474572 MGME1Q9BQP7 344 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 PPP1R12CQ9BZL4 782 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 POLR1EQ9GZS1 481 aaKnown RBP9.92□□□□□ -0.82
USP39-214ENST00000474572 FBXO6Q9NRD1 293 aaPredicted RBP9.92□□□□□ -0.82
USP39-214ENST00000474572 DNAJC28Q9NX36 388 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 SLC2A6Q9UGQ3 507 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 STOML2Q9UJZ1 356 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 MAGED2Q9UNF1 606 aaPredicted RBP9.92□□□□□ -0.82
USP39-214ENST00000474572 SORCS3Q9UPU3 1222 aa9.92□□□□□ -0.82
USP39-214ENST00000474572 ABHD14A-ACY1A0A1B0GW23 586 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 FAM95CA0A1B0GW59 222 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 HGSO14964 777 aaPredicted RBP9.91□□□□□ -0.82
USP39-214ENST00000474572 CHUKO15111 745 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 MUSKO15146 869 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 SLC7A4O43246 635 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 COCHO43405 550 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 CCDC22O60826 627 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 STC2O76061 302 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 WISP3O95389 354 aaPredicted RBP9.91□□□□□ -0.82
USP39-214ENST00000474572 FGF1P05230 155 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 SERPINA6P08185 405 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 HMBSP08397 361 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 MYL4P12829 197 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 CALB2P22676 271 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 CRABP2P29373 138 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 OR1E1P30953 314 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 ABCG1P45844 678 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 LEPRP48357 1165 aaKnown RBP9.91□□□□□ -0.82
USP39-214ENST00000474572 CD151P48509 253 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 SLC11A2P49281 568 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 CLCN5P51795 746 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 HK2P52789 917 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 RAB10P61026 200 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 IRX4P78413 519 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 MPP1Q00013 466 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 GNA12Q03113 381 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 SLC12A1Q13621 1099 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 ITGA9Q13797 1035 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 RAB33AQ14088 237 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 RFTN1Q14699 578 aaPredicted RBP9.91□□□□□ -0.82
USP39-214ENST00000474572 TBCCQ15814 346 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 SIRPB2Q5JXA9 342 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 RABGAP1LQ5R372 815 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 DEFB128Q7Z7B8 93 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 DENND6AQ8IWF6 608 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 CMTR2Q8IYT2 770 aaKnown RBP9.91□□□□□ -0.82
USP39-214ENST00000474572 CENPLQ8N0S6 344 aaPredicted RBP9.91□□□□□ -0.82
USP39-214ENST00000474572 LGI2Q8N0V4 545 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 OR13J1Q8NGT2 312 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 GABPB2Q8TAK5 448 aaPredicted RBP9.91□□□□□ -0.82
USP39-214ENST00000474572 CALML6Q8TD86 181 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 ATXN7L3BQ96GX2 97 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 NSL1Q96IY1 281 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 GPR78Q96P69 363 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 TRIB3Q96RU7 358 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 CCDC106Q9BWC9 280 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 KLF16Q9BXK1 252 aaPredicted RBP9.91□□□□□ -0.82
USP39-214ENST00000474572 ACE2Q9BYF1 805 aaPredicted RBP9.91□□□□□ -0.82
USP39-214ENST00000474572 NMUR2Q9GZQ4 415 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 RNF208Q9H0X6 261 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 ATXN3LQ9H3M9 355 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 MFSD1Q9H3U5 465 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 NMRAL1Q9HBL8 299 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 NOD2Q9HC29 1040 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 ARL8BQ9NVJ2 186 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 UXTQ9UBK9 157 aaPredicted RBP9.91□□□□□ -0.82
USP39-214ENST00000474572 FBXO5Q9UKT4 447 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 SLC39A10Q9ULF5 831 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 MAFFQ9ULX9 164 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 DNAJC16Q9Y2G8 782 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 MRPL42Q9Y6G3 142 aaKnown RBP9.91□□□□□ -0.82
USP39-214ENST00000474572 HTTP42858 3142 aa9.91□□□□□ -0.82
USP39-214ENST00000474572 GBF1Q92538 1859 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 A0A087X1B8 175 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 ILVBLA1L0T0 632 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 C2orf71A6NGG8 1288 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.9□□□□□ -0.82
USP39-214ENST00000474572 GOLGA8TH3BQL2 631 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 GFRA2O00451 464 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 LDB2O43679 373 aa9.9□□□□□ -0.82
USP39-214ENST00000474572 KDELR3O43731 214 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms