RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 IL6P05231 212 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 CYC1P08574 325 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 HNRNPA1P09651 372 aaKnown RBP eCLIP6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 CRABP2P29373 138 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC7A1P30825 629 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 MDH1P40925 334 aaKnown RBP6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 PTGER3P43115 390 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 ALDH7A1P49419 539 aaKnown RBP6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 GPX6P59796 221 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 CLCQ05315 142 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 TYRO3Q06418 890 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 RING1Q06587 406 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 SCRN1Q12765 414 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 GAS6Q14393 721 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 STILQ15468 1287 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 PARP6Q2NL67 630 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 SGO2Q562F6 1265 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 SGO1Q5FBB7 561 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 RRAGBQ5VZM2 374 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 PRR5LQ6MZQ0 368 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 LIMS2Q7Z4I7 341 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 REXO1L1PQ8IX06 675 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 RHOT2Q8IXI1 618 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 ZNF679Q8IYX0 411 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 CLRN3Q8NCR9 226 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 GSTCDQ8NEC7 633 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 TMIEQ8NEW7 156 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 KCNG4Q8TDN1 519 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 LRRC8CQ8TDW0 803 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 RAPGEF4Q8WZA2 1011 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 TSPAN17Q96FV3 270 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 PGM2Q96G03 612 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 NSMCE2Q96MF7 247 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 RAB3IPQ96QF0 476 aaPredicted RBP6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 ORAI3Q9BRQ5 295 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 SF3B5Q9BWJ5 86 aaKnown RBP6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 THAP2Q9H0W7 228 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 C14orf93Q9H972 538 aaKnown RBP6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 PCDH9Q9HC56 1237 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 CABP5Q9NP86 173 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 CENPMQ9NSP4 180 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 RCOR3Q9P2K3 495 aaPredicted RBP6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 DBF4Q9UBU7 674 aaPredicted RBP6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 FEM1BQ9UK73 627 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC22A14Q9Y267 594 aa6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 RIF1Q5UIP0 2472 aaKnown RBP6.18□□□□□ -1.42
SMARCE1-208ENST00000474246 TMEM120BA0PK00 339 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 H3BM21 787 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 FPGTO14772 594 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 KIAA0355O15063 1070 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 HCRTR2O43614 444 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 GADD45BO75293 160 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 ARP10275 920 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 EIF2S2P20042 333 aaKnown RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 ITGA6P23229 1130 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 PRAMEP78395 509 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 SPIDRQ14159 915 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 KCNAB1Q14722 419 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 EPHA7Q15375 998 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 TARBP2Q15633 366 aaKnown RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 ANO6Q4KMQ2 910 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 FIGNQ5HY92 759 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 PRAMEF20Q5VT98 475 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 ANKRD20A3Q5VUR7 823 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 GARNL3Q5VVW2 1013 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 ETFRF1Q6IPR1 90 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 ZNF813Q6ZN06 617 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 PIK3AP1Q6ZUJ8 805 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 PXKQ7Z7A4 578 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 CPLX4Q7Z7G2 160 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 PHLDB2Q86SQ0 1253 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 KIF18BQ86Y91 864 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC9A9Q8IVB4 645 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 AGGF1Q8N302 714 aaeCLIP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 RASGEF1CQ8N431 466 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 SPATA4Q8NEY3 305 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 CMASQ8NFW8 434 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 TANKQ92844 425 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 CIDECQ96AQ7 238 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 RAD51AP1Q96B01 352 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 KTI12Q96EK9 354 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 MVB12AQ96EY5 273 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 MYO19Q96H55 970 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 SCLYQ96I15 445 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 TPD52L3Q96J77 140 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 KCNK16Q96T55 309 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 INSM2Q96T92 566 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC29A1Q99808 456 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 TDRD1Q9BXT4 1180 aaKnown RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 TEX12Q9BXU0 123 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 PANK2Q9BZ23 570 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 GPR63Q9BZJ6 419 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 SUV39H2Q9H5I1 410 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 LRRC40Q9H9A6 602 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 CNGB3Q9NQW8 809 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 SMPD3Q9NY59 655 aaPredicted RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 AFF4Q9UHB7 1163 aaKnown RBP6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 ERVK-11Q9UQG0 969 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 STARD13Q9Y3M8 1113 aa6.17□□□□□ -1.42
SMARCE1-208ENST00000474246 FRMPD4Q14CM0 1322 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms