RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 ABRAXAS1Q6UWZ7 409 aa13.08□□□□□ -0.32
PCCB-210ENST00000471595 CLYBLQ8N0X4 340 aa13.08□□□□□ -0.32
PCCB-210ENST00000471595 PPTC7Q8NI37 304 aa13.08□□□□□ -0.32
PCCB-210ENST00000471595 RIBC2Q9H4K1 309 aa13.08□□□□□ -0.32
PCCB-210ENST00000471595 PTPRHQ9HD43 1115 aa13.08□□□□□ -0.32
PCCB-210ENST00000471595 ITM2BQ9Y287 266 aa13.08□□□□□ -0.32
PCCB-210ENST00000471595 BBIP1A8MTZ0 92 aa13.08□□□□□ -0.32
PCCB-210ENST00000471595 POLR2LP62875 67 aaKnown RBP13.08□□□□□ -0.32
PCCB-210ENST00000471595 ROR2Q01974 943 aaKnown RBP13.08□□□□□ -0.32
PCCB-210ENST00000471595 FOLH1Q04609 750 aa13.08□□□□□ -0.32
PCCB-210ENST00000471595 SHROOM1Q2M3G4 852 aaPredicted RBP13.08□□□□□ -0.32
PCCB-210ENST00000471595 MED8Q96G25 268 aa13.08□□□□□ -0.32
PCCB-210ENST00000471595 CYLDQ9NQC7 956 aa13.08□□□□□ -0.32
PCCB-210ENST00000471595 GIT1Q9Y2X7 761 aa13.08□□□□□ -0.32
PCCB-210ENST00000471595 HSMCR30P0CW71 290 aa13.08□□□□□ -0.32
PCCB-210ENST00000471595 EPB42P16452 691 aa13.08□□□□□ -0.32
PCCB-210ENST00000471595 MAPK8P45983 427 aa13.08□□□□□ -0.32
PCCB-210ENST00000471595 SFSWAPQ12872 951 aaKnown RBP13.08□□□□□ -0.32
PCCB-210ENST00000471595 STARD3Q14849 445 aa13.08□□□□□ -0.32
PCCB-210ENST00000471595 FAM35AQ86V20 835 aa13.08□□□□□ -0.32
PCCB-210ENST00000471595 MAGEB10Q96LZ2 347 aaPredicted RBP13.08□□□□□ -0.32
PCCB-210ENST00000471595 SDCBP2Q9H190 292 aa13.08□□□□□ -0.32
PCCB-210ENST00000471595 TCHHQ07283 1943 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 PNMA8CA0A1B0GUJ8 204 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 PAPSS1O43252 624 aaPredicted RBP13.07□□□□□ -0.32
PCCB-210ENST00000471595 ANXA5P08758 320 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 CKBP12277 381 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 BOP1Q14137 746 aaKnown RBP13.07□□□□□ -0.32
PCCB-210ENST00000471595 METTL21CQ5VZV1 264 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 PTCD2Q8WV60 388 aaKnown RBP13.07□□□□□ -0.32
PCCB-210ENST00000471595 MTERF3Q96E29 417 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 TCF12Q99081 682 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 TMEM106CQ9BVX2 250 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 NMUR2Q9GZQ4 415 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 RNASEH1O60930 286 aaKnown RBP13.07□□□□□ -0.32
PCCB-210ENST00000471595 CST3P01034 146 aaPredicted RBP13.07□□□□□ -0.32
PCCB-210ENST00000471595 IDO1P14902 403 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 CES1P23141 567 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 SERPINA4P29622 427 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 RAP1GAP2Q684P5 730 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 DNAJC14Q6Y2X3 702 aaPredicted RBP13.07□□□□□ -0.32
PCCB-210ENST00000471595 SYT12Q8IV01 421 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 ZNF557Q8N988 423 aaPredicted RBP13.07□□□□□ -0.32
PCCB-210ENST00000471595 NDNQ99608 321 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 OMDQ99983 421 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 HMG20AQ9NP66 347 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 ARL15Q9NXU5 204 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 SNX6Q9UNH7 406 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 ABCC6O95255 1503 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 IFRD1O00458 451 aaPredicted RBP13.07□□□□□ -0.32
PCCB-210ENST00000471595 TCEA3O75764 348 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 UQCRBP14927 111 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 GPR15P49685 360 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 ST13P50502 369 aaKnown RBP13.07□□□□□ -0.32
PCCB-210ENST00000471595 PSMD5Q16401 504 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 LYPLAL1Q5VWZ2 237 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 USP45Q70EL2 814 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 MAGEE2Q8TD90 523 aaPredicted RBP13.07□□□□□ -0.32
PCCB-210ENST00000471595 MRPL48Q96GC5 212 aaKnown RBP13.07□□□□□ -0.32
PCCB-210ENST00000471595 OSBPL7Q9BZF2 842 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 REEP1Q9H902 201 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 S100A14Q9HCY8 104 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 KLHL28Q9NXS3 571 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 DNMT3LQ9UJW3 386 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 NUDT5Q9UKK9 219 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 PSMD13Q9UNM6 376 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 PCDHA2Q9Y5H9 948 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 COPG1Q9Y678 874 aaKnown RBP13.07□□□□□ -0.32
PCCB-210ENST00000471595 C5orf60A6NFR6 353 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 AZIN1O14977 448 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 GCATO75600 419 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 SLC16A1P53985 500 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 GRIK3Q13003 919 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 DPYSQ14117 519 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 BROXQ5VW32 411 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 TRIM48Q8IWZ4 208 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 TPD52L3Q96J77 140 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 FAM84AQ96KN4 292 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 NTPCRQ9BSD7 190 aaKnown RBP13.07□□□□□ -0.32
PCCB-210ENST00000471595 MLPHQ9BV36 600 aaPredicted RBP13.07□□□□□ -0.32
PCCB-210ENST00000471595 PLA2G4CQ9UP65 541 aa13.07□□□□□ -0.32
PCCB-210ENST00000471595 SPTLC1O15269 473 aa13.06□□□□□ -0.32
PCCB-210ENST00000471595 PEX11AO75192 247 aa13.06□□□□□ -0.32
PCCB-210ENST00000471595 FGF1P05230 155 aa13.06□□□□□ -0.32
PCCB-210ENST00000471595 GJB1P08034 283 aa13.06□□□□□ -0.32
PCCB-210ENST00000471595 PABPC1P11940 636 aaKnown RBP13.06□□□□□ -0.32
PCCB-210ENST00000471595 TYMPP19971 482 aa13.06□□□□□ -0.32
PCCB-210ENST00000471595 PTPN9P43378 593 aa13.06□□□□□ -0.32
PCCB-210ENST00000471595 ARL4DP49703 201 aa13.06□□□□□ -0.32
PCCB-210ENST00000471595 INTS6LQ5JSJ4 861 aaKnown RBP13.06□□□□□ -0.32
PCCB-210ENST00000471595 CASP12Q6UXS9 341 aa13.06□□□□□ -0.32
PCCB-210ENST00000471595 SYTL1Q8IYJ3 562 aa13.06□□□□□ -0.32
PCCB-210ENST00000471595 PQLC1Q8N2U9 271 aa13.06□□□□□ -0.32
PCCB-210ENST00000471595 SLCO2A1Q92959 643 aa13.06□□□□□ -0.32
PCCB-210ENST00000471595 XRN1Q8IZH2 1706 aaKnown RBP13.06□□□□□ -0.32
PCCB-210ENST00000471595 SLC28A1O00337 649 aa13.06□□□□□ -0.32
PCCB-210ENST00000471595 DNM1LO00429 736 aa13.06□□□□□ -0.32
PCCB-210ENST00000471595 UNGP13051 313 aaPredicted RBP13.06□□□□□ -0.32
PCCB-210ENST00000471595 HOXB6P17509 224 aaKnown RBP13.06□□□□□ -0.32
PCCB-210ENST00000471595 ACSM2AQ08AH3 577 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms