RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 PPP6CO00743 305 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 VILLO15195 856 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 SLC25A17O43808 307 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 TMCC2O75069 709 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 NUDT3O95989 172 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 PCNAP12004 261 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 RARGP13631 454 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 BMP5P22003 454 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 TTKP33981 857 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 RFC1P35251 1148 aaPredicted RBP4.27□□□□□ -1.73
PRPF3-204ENST00000470824 PBX3P40426 434 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 RAD52P43351 418 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 GPR12P47775 334 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 CENPAP49450 140 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 EFNA5P52803 228 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 MC1RQ01726 317 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 SLC18A2Q05940 514 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 CHAF1BQ13112 559 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 ACVR2BQ13705 512 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 RUNX2Q13950 521 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 FRG1Q14331 258 aaKnown RBP4.27□□□□□ -1.73
PRPF3-204ENST00000470824 RNPS1Q15287 305 aaKnown RBP4.27□□□□□ -1.73
PRPF3-204ENST00000470824 MIDNQ504T8 468 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 ENTPD8Q5MY95 495 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 CFAP58Q5T655 872 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 NCAPH2Q6IBW4 605 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 KLHL35Q6PF15 583 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 SARM1Q6SZW1 724 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 CYP20A1Q6UW02 462 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 FAM83HQ6ZRV2 1179 aaPredicted RBP4.27□□□□□ -1.73
PRPF3-204ENST00000470824 SERPINA11Q86U17 422 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 TBC1D26Q86UD7 250 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 TRIM74Q86UV6 250 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 TRIM73Q86UV7 250 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 ZDHHC23Q8IYP9 409 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 KIAA2013Q8IYS2 634 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 WDTC1Q8N5D0 677 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 RASSF8Q8NHQ8 419 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 ATOH1Q92858 354 aaPredicted RBP4.27□□□□□ -1.73
PRPF3-204ENST00000470824 GTF3C6Q969F1 213 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 ERP27Q96DN0 273 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 CHFRQ96EP1 664 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 STRA6Q9BX79 667 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 IKZF4Q9H2S9 585 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 SMARCAD1Q9H4L7 1026 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 KAT14Q9H8E8 782 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 FBRSL1Q9HCM7 1045 aaKnown RBP4.27□□□□□ -1.73
PRPF3-204ENST00000470824 PDGFCQ9NRA1 345 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 RNF146Q9NTX7 359 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 KLHL13Q9P2N7 655 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 CTNNAL1Q9UBT7 734 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 AGO2Q9UKV8 859 aaKnown RBP4.27□□□□□ -1.73
PRPF3-204ENST00000470824 MKLN1Q9UL63 735 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 CARD8Q9Y2G2 431 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 FAM96BQ9Y3D0 163 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 RAP2CQ9Y3L5 183 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 SLC4A4Q9Y6R1 1079 aa4.27□□□□□ -1.73
PRPF3-204ENST00000470824 hCG_1807616A0A1W2PRN6 198 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 TYW5A2RUC4 315 aaKnown RBP4.26□□□□□ -1.73
PRPF3-204ENST00000470824 CBY3A6NI87 242 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 B4DLN1 442 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 EBAG9O00559 213 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 LIASO43766 372 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 AHCYL1O43865 530 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 PAGE4O60829 102 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 LATS1O95835 1130 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 TFP02787 698 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 CSH1P0DML2 217 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 CSH2P0DML3 217 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 CTSAP10619 480 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 UNGP13051 313 aaPredicted RBP4.26□□□□□ -1.73
PRPF3-204ENST00000470824 PORP16435 677 aaPredicted RBP4.26□□□□□ -1.73
PRPF3-204ENST00000470824 TM4SF1P30408 202 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 PSMB10P40306 273 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 HADHAP40939 763 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 PROK1P58294 105 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 NHLH1Q02575 133 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 CSTF3Q12996 717 aaKnown RBP4.26□□□□□ -1.73
PRPF3-204ENST00000470824 PKP1Q13835 747 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 DUSP28Q4G0W2 176 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 CEP78Q5JTW2 689 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 KIAA1614Q5VZ46 1190 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 TMEM154Q6P9G4 183 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 TSSK4Q6SA08 328 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 ZNF66Q6ZN08 573 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 KDELC2Q7Z4H8 507 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 LURAP1LQ8IV03 231 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 ARHGAP12Q8IWW6 846 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 CADM3Q8N126 398 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 OR8H2Q8N162 312 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 PSPC1Q8WXF1 523 aaKnown RBP4.26□□□□□ -1.73
PRPF3-204ENST00000470824 FAM120BQ96EK7 910 aaKnown RBP4.26□□□□□ -1.73
PRPF3-204ENST00000470824 CALML4Q96GE6 196 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 ZNF333Q96JL9 665 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 CMTM3Q96MX0 182 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 BBS4Q96RK4 519 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 SIGLEC11Q96RL6 698 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 NUF2Q9BZD4 464 aa4.26□□□□□ -1.73
PRPF3-204ENST00000470824 GLIS2Q9BZE0 524 aaPredicted RBP4.26□□□□□ -1.73
PRPF3-204ENST00000470824 SEMA4CQ9C0C4 833 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms