RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 HJURPQ8NCD3 748 aaPredicted RBP6.78□□□□□ -1.32
VAMP3-202ENST00000470357 NSMCE1Q8WV22 266 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 HNRNPLLQ8WVV9 542 aaKnown RBP6.78□□□□□ -1.32
VAMP3-202ENST00000470357 FATE1Q969F0 183 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 TP53INP1Q96A56 240 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 E2F7Q96AV8 911 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 ZNF707Q96C28 371 aaPredicted RBP6.78□□□□□ -1.32
VAMP3-202ENST00000470357 HDAC11Q96DB2 347 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 RMDN1Q96DB5 314 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 RTP4Q96DX8 246 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 SNF8Q96H20 258 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 MEGF10Q96KG7 1140 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 OLFM3Q96PB7 478 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 TSGA13Q96PP4 275 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 QKIQ96PU8 341 aaKnown RBP eCLIP6.78□□□□□ -1.32
VAMP3-202ENST00000470357 PRMT1Q99873 361 aaKnown RBP6.78□□□□□ -1.32
VAMP3-202ENST00000470357 SLC46A2Q9BY10 475 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 FOXP3Q9BZS1 431 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 ANKZF1Q9H8Y5 726 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 EPB41L5Q9HCM4 733 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 ANLNQ9NQW6 1124 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 GDF3Q9NR23 364 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 TDP1Q9NUW8 608 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 HCFC1R1Q9NWW0 138 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 OBP2AQ9NY56 170 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 GDE1Q9NZC3 331 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 WHRNQ9P202 907 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 PAK5Q9P286 719 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 MTRF1LQ9UGC7 380 aaKnown RBP6.78□□□□□ -1.32
VAMP3-202ENST00000470357 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.78□□□□□ -1.32
VAMP3-202ENST00000470357 VANGL2Q9ULK5 521 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 SORCS3Q9UPU3 1222 aa6.78□□□□□ -1.32
VAMP3-202ENST00000470357 ZFP37Q9Y6Q3 630 aaPredicted RBP6.78□□□□□ -1.32
VAMP3-202ENST00000470357 V9GYY5 206 aaPredicted RBP6.78□□□□□ -1.32
VAMP3-202ENST00000470357 SPTBN2O15020 2390 aa6.77□□□□□ -1.32
VAMP3-202ENST00000470357 CACNA1GO43497 2377 aa6.77□□□□□ -1.32
VAMP3-202ENST00000470357 GPR179Q6PRD1 2367 aa6.77□□□□□ -1.32
VAMP3-202ENST00000470357 DENND4AQ7Z401 1863 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 DOCK8Q8NF50 2099 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 GOLGA6CA6NDK9 693 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 GOLGA6BA6NDN3 693 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 C5orf60A6NFR6 353 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 C2CD4DB7Z1M9 353 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 KCNN4O15554 427 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 PI15O43692 258 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 MFSD11O43934 449 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 RAMP2O60895 175 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 GCATO75600 419 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 IFNB1P01574 187 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 GOLGA6DP0CG33 693 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 IRF1P10914 325 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 ESRRAP11474 423 aaPredicted RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 SP100P23497 879 aaPredicted RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 CCNCP24863 283 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 OR1E1P30953 314 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 ADCY8P40145 1251 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 GARSP41250 739 aaKnown RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 MTHFRP42898 656 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 KCNJ1P48048 391 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 CLCN5P51795 746 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 SLC7A5Q01650 507 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 GBE1Q04446 702 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 PPIDQ08752 370 aaKnown RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 AP1B1Q10567 949 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 ZNF177Q13360 481 aaPredicted RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 HLTFQ14527 1009 aaKnown RBP eCLIP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 PRKD1Q15139 912 aaPredicted RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 TEAD2Q15562 447 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 MPPE1Q53F39 396 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 FAM133BQ5BKY9 247 aaKnown RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 NKAPLQ5M9Q1 402 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 ATAT1Q5SQI0 421 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 RARS2Q5T160 578 aaKnown RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 CWF19L1Q69YN2 538 aaKnown RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 ITPRIPL1Q6GPH6 555 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 EMBQ6PCB8 327 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 TMC5Q6UXY8 1006 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 CCNI2Q6ZMN8 369 aaPredicted RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 ACAD11Q709F0 780 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 SETD3Q86TU7 594 aaPredicted RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 ZC3H18Q86VM9 953 aaKnown RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 UBALD2Q8IYN6 164 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 ZNF683Q8IZ20 524 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 CELF5Q8N6W0 485 aaKnown RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 CCNYQ8ND76 341 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 UBASH3BQ8TF42 649 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 HTR3CQ8WXA8 447 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 TMA16Q96EY4 203 aaKnown RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 PKNOX2Q96KN3 472 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 NECTIN4Q96NY8 510 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 CYP2S1Q96SQ9 504 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 TMEM121Q9BTD3 319 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 SSBP4Q9BWG4 385 aaPredicted RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 FRMD8Q9BZ67 464 aaPredicted RBP6.77□□□□□ -1.33
VAMP3-202ENST00000470357 KLC2Q9H0B6 622 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 MAGEH1Q9H213 219 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 ADAM7Q9H2U9 754 aa6.77□□□□□ -1.33
VAMP3-202ENST00000470357 ARFGAP3Q9NP61 516 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms