RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 COLGALT2Q8IYK4 626 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 KRT78Q8N1N4 520 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 THEM5Q8N1Q8 247 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 XXYLT1Q8NBI6 393 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 SPPL3Q8TCT6 385 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 KBTBD7Q8WVZ9 684 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 GBF1Q92538 1859 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 EXTL1Q92935 676 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 DNAJC19Q96DA6 116 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 MARS2Q96GW9 593 aaKnown RBP6.63□□□□□ -1.35
PTCD3-208ENST00000469585 SNX27Q96L92 541 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 RIPOR3Q96MK2 946 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 TTPALQ9BTX7 342 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 DPH1Q9BZG8 443 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 CWH43Q9H720 699 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 VSX1Q9NZR4 365 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-208ENST00000469585 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-208ENST00000469585 C2CD2Q9Y426 696 aa6.63□□□□□ -1.35
PTCD3-208ENST00000469585 NLRC5Q86WI3 1866 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 SMIM28A0A1B0GU29 152 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 FRMD3A2A2Y4 597 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 PODXLO00592 558 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 PMM2O15305 246 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 INPPL1O15357 1258 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 DNAJB5O75953 348 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 SCAF4O95104 1147 aaKnown RBP6.62□□□□□ -1.35
PTCD3-208ENST00000469585 MBD3O95983 291 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 GLUD1P00367 558 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 CTSAP10619 480 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 KCNE1P15382 129 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 HOXB8P17481 243 aaPredicted RBP6.62□□□□□ -1.35
PTCD3-208ENST00000469585 PROZP22891 400 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 ACOT2P49753 483 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 TNNC1P63316 161 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 TCF15Q12870 199 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 BIRC3Q13489 604 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 CUL4BQ13620 913 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 KCNB1Q14721 858 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 TAF12Q16514 161 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 USP39Q53GS9 565 aaKnown RBP6.62□□□□□ -1.35
PTCD3-208ENST00000469585 TCEAL5Q5H9L2 206 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 CRB2Q5IJ48 1285 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 GLRA4Q5JXX5 417 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 FAM171A1Q5VUB5 890 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 ZNF280DQ6N043 979 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 FUT10Q6P4F1 479 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 LRRC55Q6ZSA7 311 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 GPR65Q8IYL9 337 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 PDPRQ8NCN5 879 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 PABPC5Q96DU9 382 aaKnown RBP6.62□□□□□ -1.35
PTCD3-208ENST00000469585 PNKPQ96T60 521 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 HERC2P3Q9BVR0 1158 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 REXO4Q9GZR2 422 aaKnown RBP6.62□□□□□ -1.35
PTCD3-208ENST00000469585 TRPM5Q9NZQ8 1165 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 HSFX1Q9UBD0 423 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 DNAJB4Q9UDY4 337 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 ITGA11Q9UKX5 1188 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 HPSEQ9Y251 543 aa6.62□□□□□ -1.35
PTCD3-208ENST00000469585 MYO9BQ13459 2157 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 TDRD15B5MCY1 1934 aaKnown RBP6.61□□□□□ -1.35
PTCD3-208ENST00000469585 A0A1B0GTW7 788 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 ISM1B1AKI9 464 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 TMEM189-UBE2V1I3L0A0 370 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 PDXKO00764 312 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 PRRG1O14668 218 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 SYN3O14994 580 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 CETN3O15182 167 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 HUS1O60921 280 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 RHOBTB3O94955 611 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 ABHD16AO95870 558 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 CHEK2O96017 543 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 ELANEP08246 267 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 DLATP10515 647 aaKnown RBP6.61□□□□□ -1.35
PTCD3-208ENST00000469585 KCNA5P22460 613 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 SLC7A1P30825 629 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 PBX3P40426 434 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 TAF6P49848 677 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 ZNF135P52742 658 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-208ENST00000469585 RBP5P82980 135 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 SLC25A3Q00325 362 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 TSPY1Q01534 308 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 YWHAHQ04917 246 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-208ENST00000469585 ITIH3Q06033 890 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 DSC1Q08554 894 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 MYBPC2Q14324 1141 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 HABP2Q14520 560 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-208ENST00000469585 PSMD5Q16401 504 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 SNRNP35Q16560 246 aaKnown RBP6.61□□□□□ -1.35
PTCD3-208ENST00000469585 ZNF658Q5TYW1 1059 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-208ENST00000469585 JADE1Q6IE81 842 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 ZNF280BQ86YH2 543 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 C1orf210Q8IVY1 113 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 CFAP52Q8N1V2 620 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 CSGALNACT2Q8N6G5 542 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 MRPL43Q8N983 215 aaKnown RBP6.61□□□□□ -1.35
PTCD3-208ENST00000469585 TRIML1Q8N9V2 468 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 ANKRD20A12PQ8NF67 263 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 CPT1CQ8TCG5 803 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 HASPINQ8TF76 798 aa6.61□□□□□ -1.35
PTCD3-208ENST00000469585 SAAL1Q96ER3 474 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms