RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 KYAT3Q6YP21 454 aaKnown RBP9.45□□□□□ -0.9
SMC1A-205ENST00000469129 KIAA0408Q6ZU52 694 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 SPATA31D4Q6ZUB0 917 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 HTR3DQ70Z44 454 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 GAREM2Q75VX8 874 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 STRA8Q7Z7C7 330 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 LCA5Q86VQ0 697 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 TDHQ8IZJ6 230 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 CARNMT1Q8N4J0 409 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 MAB21L3Q8N8X9 362 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 DCAF4L2Q8NA75 395 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 ARRDC2Q8TBH0 407 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 SPPL3Q8TCT6 385 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 USP13Q92995 863 aaPredicted RBP9.45□□□□□ -0.9
SMC1A-205ENST00000469129 ISL2Q96A47 359 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 TMA16Q96EY4 203 aaKnown RBP9.45□□□□□ -0.9
SMC1A-205ENST00000469129 MYEOVQ96EZ4 313 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 TSNARE1Q96NA8 513 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 FCRL3Q96P31 734 aaPredicted RBP9.45□□□□□ -0.9
SMC1A-205ENST00000469129 KLF6Q99612 283 aaPredicted RBP9.45□□□□□ -0.9
SMC1A-205ENST00000469129 SEMA3CQ99985 751 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 CORO1BQ9BR76 489 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 SPON2Q9BUD6 331 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 C2orf49Q9BVC5 232 aaPredicted RBP9.45□□□□□ -0.9
SMC1A-205ENST00000469129 UGT1A7Q9HAW7 530 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 UGT1A10Q9HAW8 530 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 UGT1A8Q9HAW9 530 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 MAN1C1Q9NR34 630 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 CHRAC1Q9NRG0 131 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 FGFR1OP2Q9NVK5 253 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 CFAP97Q9P2B7 532 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 VPS28Q9UK41 221 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 RIMKLBQ9ULI2 386 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 GRID1Q9ULK0 1009 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 ARHGAP26Q9UNA1 814 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 ARIH1Q9Y4X5 557 aaPredicted RBP9.45□□□□□ -0.9
SMC1A-205ENST00000469129 LAMA3Q16787 3333 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 A0A0D9SEW6 157 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 LOC285095A0A1B0GVY8 99 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 A0A1W2PRU2 124 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 E2F8A0AVK6 867 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 LCHNA4D1U4 455 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 CBX4O00257 560 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 GFRA2O00451 464 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 TPP1O14773 563 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 BIRC5O15392 142 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 CCL16O15467 120 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 SIN3BO75182 1162 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 NDST3O95803 873 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 DHRS4L1P0CG22 281 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 NEFHP12036 1026 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 TAC1P20366 129 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 AVPR1AP37288 418 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 MAPK8P45983 427 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 HNRNPH2P55795 449 aaKnown RBP9.44□□□□□ -0.9
SMC1A-205ENST00000469129 ERVFC1P60507 584 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 CDK18Q07002 472 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 SLC12A1Q13621 1099 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 ZKSCAN8Q15776 578 aaPredicted RBP9.44□□□□□ -0.9
SMC1A-205ENST00000469129 TAF1BQ53T94 588 aaPredicted RBP9.44□□□□□ -0.9
SMC1A-205ENST00000469129 INO80DQ53TQ3 878 aaPredicted RBP9.44□□□□□ -0.9
SMC1A-205ENST00000469129 HSP90AA5PQ58FG0 334 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 TSTD2Q5T7W7 516 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 GPR158Q5T848 1215 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 TEDDM1Q5T9Z0 273 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 RETSATQ6NUM9 610 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 CES3Q6UWW8 571 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 SH2D5Q6ZV89 423 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 SPATA21Q7Z572 469 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 YTHDF3Q7Z739 585 aaKnown RBP9.44□□□□□ -0.9
SMC1A-205ENST00000469129 PIGWQ7Z7B1 504 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 GALNT7Q86SF2 657 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 MFN1Q8IWA4 741 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 UNC5BQ8IZJ1 945 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 HS6ST3Q8IZP7 471 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 NDUFAF2Q8N183 169 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 PGBD5Q8N414 524 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 SLC25A41Q8N5S1 370 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 TDRD5Q8NAT2 981 aaKnown RBP9.44□□□□□ -0.9
SMC1A-205ENST00000469129 MICAL1Q8TDZ2 1067 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 ADAMTS19Q8TE59 1207 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 SREK1Q8WXA9 508 aaKnown RBP9.44□□□□□ -0.9
SMC1A-205ENST00000469129 MFSD3Q96ES6 412 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 SEC16BQ96JE7 1060 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 FAM111AQ96PZ2 611 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 NUDCD1Q96RS6 583 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 SLC22A12Q96S37 553 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 RHOJQ9H4E5 214 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 ALG13Q9NP73 1137 aaKnown RBP9.44□□□□□ -0.9
SMC1A-205ENST00000469129 SCUBE2Q9NQ36 999 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 IARS2Q9NSE4 1012 aaKnown RBP9.44□□□□□ -0.9
SMC1A-205ENST00000469129 TREX1Q9NSU2 369 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 ZDHHC7Q9NXF8 308 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 DCDC2Q9UHG0 476 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 ANKRD6Q9Y2G4 727 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 STARD13Q9Y3M8 1113 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 KIAA1549LQ6ZVL6 1849 aa9.44□□□□□ -0.9
SMC1A-205ENST00000469129 HIDE1A8MVS5 230 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 LEFTY2O00292 366 aa9.43□□□□□ -0.9
SMC1A-205ENST00000469129 KLF11O14901 512 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms