RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 hCG_1818297A0A087WSY0 165 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 TCRBV21S2A2A0A5A6 115 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 FAM170AA1A519 330 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 FAM86C2PA6NEL3 165 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 HACD1B0YJ81 288 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SHISA8B8ZZ34 492 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 CBX4O00257 560 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 CES2O00748 559 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 APOL1O14791 398 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PPP1R12AO14974 1030 aaPredicted RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 TRIM24O15164 1050 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 KIF5CO60282 957 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 FOXD2O60548 495 aaPredicted RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 RNASEH1O60930 286 aaKnown RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SOCS5O75159 536 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 ZNF821O75541 412 aaPredicted RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 TJP3O95049 919 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 POP4O95707 220 aaKnown RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 CD160O95971 181 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PEX11BO96011 259 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PRNPP04156 253 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 KRT1P04264 644 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 TUBB4AP04350 444 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PTMAP06454 111 aaKnown RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 EPHX1P07099 455 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 FBXO45P0C2W1 286 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SP9P0CG40 484 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SRCP12931 536 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PRLRP16471 622 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 GABRG2P18507 467 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 C5AR1P21730 350 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PRKCHP24723 683 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 CCNCP24863 283 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 NFKBIAP25963 317 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 MZF1P28698 734 aaPredicted RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 OXTRP30559 389 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 NUDT1P36639 197 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 P2RY2P41231 377 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 NBL1P41271 181 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 IL12RB1P42701 662 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SSR1P43307 286 aaKnown RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 RECQLP46063 649 aaPredicted RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SCTRP47872 440 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PAPOLAP51003 745 aaKnown RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 COPAP53621 1224 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 NAP1L1P55209 391 aaKnown RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SNRPD1P62314 119 aaKnown RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 IFI35P80217 286 aaPredicted RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SATB1Q01826 763 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PPIDQ08752 370 aaKnown RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 TCF15Q12870 199 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 KLF1Q13351 362 aaPredicted RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 DLG2Q15700 870 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 TTC31Q49AM3 519 aaPredicted RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 FNDC3BQ53EP0 1204 aaKnown RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 USP39Q53GS9 565 aaKnown RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 MEI1Q5TIA1 1274 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 EMC10Q5UCC4 262 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 DAB2IPQ5VWQ8 1189 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 ZNF776Q68DI1 518 aaPredicted RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 NCBP2-AS2Q69YL0 99 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 IL31Q6EBC2 164 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 NEK5Q6P3R8 708 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 C22orf39Q6P5X5 142 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PKN3Q6P5Z2 889 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 LINC00114Q6XXX2 140 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SLC36A4Q6YBV0 504 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SPOCD1Q6ZMY3 1216 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 RABEPKQ7Z6M1 372 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 TMPRSS6Q8IU80 811 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SFTPA1Q8IWL2 248 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 RAVER1Q8IY67 606 aaKnown RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 ATPAF2Q8N5M1 289 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 TEX26Q8N6G2 289 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PLD5Q8N7P1 536 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 GOLGA6L1Q8N7Z2 621 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 ATP11CQ8NB49 1132 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 MDGA1Q8NFP4 955 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 CADM4Q8NFZ8 388 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 OR7D4Q8NG98 312 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 OR2A12Q8NGT7 310 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 NSMCE1Q8WV22 266 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 GAB3Q8WWW8 586 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 ATRIPQ8WXE1 791 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SORCS1Q8WY21 1168 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 OR8D1Q8WZ84 308 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 MAML1Q92585 1016 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 ALG3Q92685 438 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PRCCQ92733 491 aaPredicted RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 P3H4Q92791 437 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PTPRN2Q92932 1015 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 HMCESQ96FZ2 354 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PPP1R16AQ96I34 528 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 LOXL4Q96JB6 756 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 ZC3H10Q96K80 434 aaKnown RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 SPACA7Q96KW9 195 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 GDAP1L1Q96MZ0 367 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 ZNF641Q96N77 438 aaPredicted RBP3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PPP1R2P1Q96PQ5 205 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms