RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 LCA5Q86VQ0 697 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 BHLHE22Q8NFJ8 381 aaPredicted RBP15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 COPS7BQ9H9Q2 264 aaPredicted RBP15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 EFCAB1Q9HAE3 211 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 ZFYVE28Q9HCC9 887 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 ZBTB26Q9HCK0 441 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 PREBQ9HCU5 417 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 VCX3AQ9NNX9 186 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 BCAP29Q9UHQ4 241 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 Q9Y3F1 56 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 STX16-NPEPL1H3BU86 382 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 DENRO43583 198 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 MT-CYBP00156 380 aaPredicted RBP15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 PMLP29590 882 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 DPP6P42658 865 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 CXCR3P49682 368 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 DYNC1I2Q13409 638 aaKnown RBP15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 ADGRE1Q14246 886 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 RAB41Q5JT25 222 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 ZFP1Q6P2D0 407 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 CEP97Q8IW35 865 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 MARVELD2Q8N4S9 558 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 RNF34Q969K3 372 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 TBL1YQ9BQ87 522 aa15.98■□□□□ 0.15
TSPAN4-211ENST00000468468 DFFAO00273 331 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 AP1G1O43747 822 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 DNAJA2O60884 412 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 CTSHP09668 335 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 SRGAP2BP0DMP2 458 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 ME2P23368 584 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 DNAJB2P25686 324 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 HOXC8P31273 242 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 RAB10P61026 200 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 HERC3Q15034 1050 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 UGP2Q16851 508 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 RWDD4Q6NW29 188 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 ARHGAP36Q6ZRI8 547 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 NAT14Q8WUY8 206 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 DPF3Q92784 378 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 PPP1R10Q96QC0 940 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 FTHL17Q9BXU8 183 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 Q9H521 79 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 RRN3Q9NYV6 651 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 AAR2Q9Y312 384 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 FAM95CA0A1B0GW59 222 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 TMEM233B4DJY2 109 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 PGM3O95394 542 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 SLC10A3P09131 477 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 STMN1P16949 149 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 MAGEA8P43361 318 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 ESRP1Q6NXG1 681 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 ISLR2Q6UXK2 745 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 MFSD6LQ8IWD5 586 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 RBM12BQ8IXT5 1001 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 IPMKQ8NFU5 416 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 NPAS2Q99743 824 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 TSPYL2Q9H2G4 693 aaPredicted RBP15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 RIMS3Q9UJD0 308 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 COPG1Q9Y678 874 aaKnown RBP15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 COMMD3-BMI1R4GMX3 469 aa15.97■□□□□ 0.15
TSPAN4-211ENST00000468468 ATP6V1G1O75348 118 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 AFF1P51825 1210 aaKnown RBP15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 ZNF135P52742 658 aaPredicted RBP15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 COG7P83436 770 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 TSTD2Q5T7W7 516 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 PM20D1Q6GTS8 502 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 KDM1BQ8NB78 822 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 SGF29Q96ES7 293 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 TMA16Q96EY4 203 aaKnown RBP15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 GPR78Q96P69 363 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 UBAP1Q9NZ09 502 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 GABRQQ9UN88 632 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 TADA2AO75478 443 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 OR6B1O95007 311 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 CRTAMO95727 393 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 DCLRE1AQ6PJP8 1040 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 BHLHA9Q7RTU4 235 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 LILRA2Q8N149 483 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 PDCD6IPQ8WUM4 868 aaKnown RBP15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 STON2Q8WXE9 905 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 ELMO2Q96JJ3 720 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 TSGA13Q96PP4 275 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 HAPLN3Q96S86 360 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 NDNQ99608 321 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 FICDQ9BVA6 458 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 RHOBTB2Q9BYZ6 727 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 SIK2Q9H0K1 926 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 RAB26Q9ULW5 256 aa15.96■□□□□ 0.15
TSPAN4-211ENST00000468468 HHLA1C9JL84 531 aa15.95■□□□□ 0.14
TSPAN4-211ENST00000468468 DUSP11O75319 330 aaKnown RBP15.95■□□□□ 0.14
TSPAN4-211ENST00000468468 SMIM18P0DKX4 95 aa15.95■□□□□ 0.14
TSPAN4-211ENST00000468468 TCN1P20061 433 aaPredicted RBP15.95■□□□□ 0.14
TSPAN4-211ENST00000468468 DNAJB1P25685 340 aa15.95■□□□□ 0.14
TSPAN4-211ENST00000468468 LHX1P48742 406 aa15.95■□□□□ 0.14
TSPAN4-211ENST00000468468 TRIM32Q13049 653 aa15.95■□□□□ 0.14
TSPAN4-211ENST00000468468 SH2D4BQ5SQS7 431 aa15.95■□□□□ 0.14
TSPAN4-211ENST00000468468 GDF6Q6KF10 455 aaPredicted RBP15.95■□□□□ 0.14
TSPAN4-211ENST00000468468 TAC4Q86UU9 113 aa15.95■□□□□ 0.14
TSPAN4-211ENST00000468468 TMEM126BQ8IUX1 230 aa15.95■□□□□ 0.14
TSPAN4-211ENST00000468468 CNTN4Q8IWV2 1026 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms