RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 D6RAR5 112 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 AGRPO00253 132 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 NVLO15381 856 aaKnown RBP18.97■□□□□ 0.63
LINC00888-201ENST00000468380 ERBB2P04626 1255 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 LIPCP11150 499 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 OR1E1P30953 314 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 NOS2P35228 1153 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 THOP1P52888 689 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 INHBCP55103 352 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 TLE1Q04724 770 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 PTK2BQ14289 1009 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 CLCA4Q14CN2 919 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 TCEA2Q15560 299 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 GJB7Q6PEY0 223 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 C11orf57Q6ZUT1 292 aaPredicted RBP18.97■□□□□ 0.63
LINC00888-201ENST00000468380 VPS36Q86VN1 386 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 ZFAND4Q86XD8 727 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 PASD1Q8IV76 773 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 KYQ8NBH2 561 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 GFM1Q96RP9 751 aaKnown RBP18.97■□□□□ 0.63
LINC00888-201ENST00000468380 NPY6RQ99463 290 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 SLC13A1Q9BZW2 595 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 ZDHHC6Q9H6R6 413 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 HECAQ9UBI9 543 aaPredicted RBP18.97■□□□□ 0.63
LINC00888-201ENST00000468380 PCDHGA4Q9Y5G9 962 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 TEX15Q9BXT5 2789 aa18.97■□□□□ 0.63
LINC00888-201ENST00000468380 LRRK2Q5S007 2527 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 ILVBLA1L0T0 632 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 DAB1O75553 588 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 RPLP0P05388 317 aaKnown RBP18.96■□□□□ 0.63
LINC00888-201ENST00000468380 SFTPCP11686 197 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 ITIH1P19827 911 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 EIF4A3P38919 411 aaKnown RBP18.96■□□□□ 0.63
LINC00888-201ENST00000468380 ETV5P41161 510 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 SLC6A3Q01959 620 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 SLC20A2Q08357 652 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 ISM2Q6H9L7 571 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 RETSATQ6NUM9 610 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 ZSCAN30Q86W11 494 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 ARL10Q8N8L6 244 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 OR6K2Q8NGY2 324 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 C1orf74Q96LT6 269 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 TM6SF2Q9BZW4 377 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 STRADBQ9C0K7 418 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 LRRN3Q9H3W5 708 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 NBASA2RRP1 2371 aa18.96■□□□□ 0.63
LINC00888-201ENST00000468380 PRAMEF33A0A0G2JMD5 474 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 TMX2-CTNND1H3BSU7 103 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 NEMP1O14524 444 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 AREL1O15033 823 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 PRAMEF10O60809 474 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 ITIH2P19823 946 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 CCKBRP32239 447 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 YPEL5P62699 121 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 PPARDQ03181 441 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 BRMS1LQ5PSV4 323 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 MANEAQ5SRI9 462 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 TTI2Q6NXR4 508 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 MACC1Q6ZN28 852 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 SLC26A9Q7LBE3 791 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 TRIM59Q8IWR1 403 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 FMR1NBQ8N0W7 255 aaPredicted RBP18.95■□□□□ 0.62
LINC00888-201ENST00000468380 PCDH19Q8TAB3 1148 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 NT5C3BQ969T7 300 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 RAB7BQ96AH8 199 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 SRRTQ9BXP5 876 aaKnown RBP18.95■□□□□ 0.62
LINC00888-201ENST00000468380 CPEB1Q9BZB8 566 aaKnown RBP18.95■□□□□ 0.62
LINC00888-201ENST00000468380 GDPD2Q9HCC8 539 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 ATP13A1Q9HD20 1204 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 FOXJ2Q9P0K8 574 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 LOXL2Q9Y4K0 774 aa18.95■□□□□ 0.62
LINC00888-201ENST00000468380 MMP20O60882 483 aa18.94■□□□□ 0.62
LINC00888-201ENST00000468380 SRGAP2O75044 1071 aa18.94■□□□□ 0.62
LINC00888-201ENST00000468380 JMJD7P0C870 316 aa18.94■□□□□ 0.62
LINC00888-201ENST00000468380 APBA1Q02410 837 aa18.94■□□□□ 0.62
LINC00888-201ENST00000468380 ZFP36L1Q07352 338 aaKnown RBP18.94■□□□□ 0.62
LINC00888-201ENST00000468380 UBAP2LQ14157 1087 aaKnown RBP18.94■□□□□ 0.62
LINC00888-201ENST00000468380 ZNF805Q5CZA5 627 aa18.94■□□□□ 0.62
LINC00888-201ENST00000468380 LRRC73Q5JTD7 316 aa18.94■□□□□ 0.62
LINC00888-201ENST00000468380 LRRC31Q6UY01 552 aa18.94■□□□□ 0.62
LINC00888-201ENST00000468380 DTX1Q86Y01 620 aa18.94■□□□□ 0.62
LINC00888-201ENST00000468380 C1orf131Q8NDD1 294 aaKnown RBP18.94■□□□□ 0.62
LINC00888-201ENST00000468380 ZNF397Q8NF99 534 aaPredicted RBP18.94■□□□□ 0.62
LINC00888-201ENST00000468380 TSACCQ96A04 125 aaPredicted RBP18.94■□□□□ 0.62
LINC00888-201ENST00000468380 DHTKD1Q96HY7 919 aaPredicted RBP18.94■□□□□ 0.62
LINC00888-201ENST00000468380 FUCA2Q9BTY2 467 aa18.94■□□□□ 0.62
LINC00888-201ENST00000468380 SLC25A18Q9H1K4 315 aa18.94■□□□□ 0.62
LINC00888-201ENST00000468380 GEMIN8Q9NWZ8 242 aaKnown RBP18.94■□□□□ 0.62
LINC00888-201ENST00000468380 PCDHGC3Q9UN70 934 aa18.94■□□□□ 0.62
LINC00888-201ENST00000468380 DOCK4Q8N1I0 1966 aa18.93■□□□□ 0.62
LINC00888-201ENST00000468380 HK3P52790 923 aa18.93■□□□□ 0.62
LINC00888-201ENST00000468380 RNASE9P60153 205 aaKnown RBP18.93■□□□□ 0.62
LINC00888-201ENST00000468380 GNA12Q03113 381 aa18.93■□□□□ 0.62
LINC00888-201ENST00000468380 PTPN20Q4JDL3 420 aa18.93■□□□□ 0.62
LINC00888-201ENST00000468380 LVRNQ6Q4G3 990 aa18.93■□□□□ 0.62
LINC00888-201ENST00000468380 ZNF783Q6ZMS7 281 aa18.93■□□□□ 0.62
LINC00888-201ENST00000468380 HID1Q8IV36 788 aa18.93■□□□□ 0.62
LINC00888-201ENST00000468380 HSCBQ8IWL3 235 aa18.93■□□□□ 0.62
LINC00888-201ENST00000468380 PLPP6Q8IY26 295 aa18.93■□□□□ 0.62
LINC00888-201ENST00000468380 RYBPQ8N488 228 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms