RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 GRIA4P48058 902 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 AFF3P51826 1226 aaKnown RBP11.34□□□□□ -0.59
COL4A6-205ENST00000468338 CCNHP51946 323 aaPredicted RBP11.34□□□□□ -0.59
COL4A6-205ENST00000468338 RACK1P63244 317 aaKnown RBP11.34□□□□□ -0.59
COL4A6-205ENST00000468338 SLC25A11Q02978 314 aaKnown RBP11.34□□□□□ -0.59
COL4A6-205ENST00000468338 GRIK2Q13002 908 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 DPYSQ14117 519 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.34□□□□□ -0.59
COL4A6-205ENST00000468338 RFX8Q6ZV50 586 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 PIP4P1Q86T03 277 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 ARHGAP12Q8IWW6 846 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 MINDY1Q8N5J2 469 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 OR14C36Q8NHC7 312 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 FAM71BQ8TC56 605 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 TEKT4Q8WW24 435 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 ARRDC3Q96B67 414 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 HMCESQ96FZ2 354 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 LRIG1Q96JA1 1093 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 CHP1Q99653 195 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 HEPHQ9BQS7 1158 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 HDAC8Q9BY41 377 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 MIR1-1HGQ9H1L0 117 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 TNKS2Q9H2K2 1166 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 PDFQ9HBH1 243 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 TM9SF3Q9HD45 589 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 CWC15Q9P013 229 aaKnown RBP11.34□□□□□ -0.59
COL4A6-205ENST00000468338 UVRAGQ9P2Y5 699 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 IL36AQ9UHA7 158 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 ANAPC7Q9UJX3 599 aa11.34□□□□□ -0.59
COL4A6-205ENST00000468338 MYO1FO00160 1098 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 EEF2KO00418 725 aaKnown RBP11.33□□□□□ -0.6
COL4A6-205ENST00000468338 PLK4O00444 970 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 BNIP3LO60238 219 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 LILRA1O75019 489 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 LEFTY1O75610 366 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 H2AFZP0C0S5 128 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 ZNF883P0CG24 379 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 RARAP10276 462 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 ERCC2P18074 760 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 NUDT1P36639 197 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 MAPK8P45983 427 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 RECQLP46063 649 aaPredicted RBP11.33□□□□□ -0.6
COL4A6-205ENST00000468338 CSNK1EP49674 416 aaKnown RBP11.33□□□□□ -0.6
COL4A6-205ENST00000468338 ADKP55263 362 aaKnown RBP11.33□□□□□ -0.6
COL4A6-205ENST00000468338 PPP2CBP62714 309 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 PPP2CAP67775 309 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 CCDC15Q0P6D6 951 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 SLC14A1Q13336 389 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 TXNRD3NBQ6F5E7 133 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 NEK5Q6P3R8 708 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 DBX2Q6ZNG2 339 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 H2AFVQ71UI9 128 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 POLNQ7Z5Q5 900 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 TRIM69Q86WT6 500 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 CNGA4Q8IV77 575 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 OR2AP1Q8NGE2 309 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 BTBD6Q96KE9 485 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 CITED4Q96RK1 184 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 PACSIN1Q9BY11 444 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 RBCK1Q9BYM8 510 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 SLC39A8Q9C0K1 460 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 RBSNQ9H1K0 784 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 PREBQ9HCU5 417 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 ZNHIT6Q9NWK9 470 aaKnown RBP11.33□□□□□ -0.6
COL4A6-205ENST00000468338 SCHIP1Q9P0W5 487 aaPredicted RBP11.33□□□□□ -0.6
COL4A6-205ENST00000468338 HECAQ9UBI9 543 aaPredicted RBP11.33□□□□□ -0.6
COL4A6-205ENST00000468338 MFHAS1Q9Y4C4 1052 aa11.33□□□□□ -0.6
COL4A6-205ENST00000468338 ARID1BQ8NFD5 2236 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TPRP12270 2363 aaKnown RBP11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TBC1D3DA0A087WVF3 549 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TBC1D3IA0A087WXS9 549 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TBC1D3EA0A087X179 549 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TBC1D3KA0A087X1G2 549 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 A0A1B0GVT2 93 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 A0A1W2PR77 199 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TBC1D3FA6NER0 549 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-205ENST00000468338 FAM47DPA6NHR8 397 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TBC1D3LB9A6J9 549 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 KPNA3O00505 521 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-205ENST00000468338 VILLO15195 856 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 BUB1O43683 1085 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 PRAMEF11O60813 436 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 OPHN1O60890 802 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TMCC1O94876 653 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 KCNK5O95279 499 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 POP4O95707 220 aaKnown RBP11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TPM1P09493 284 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TMEM253P0C7T8 217 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 TBC1D3HP0C7X1 549 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 CEACAM1P13688 526 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 CD59P13987 128 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 IL4RP24394 825 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 MPSTP25325 297 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 ITGB7P26010 798 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 ARSEP51690 589 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 ATXN3P54252 364 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-205ENST00000468338 SNRPD1P62314 119 aaKnown RBP11.32□□□□□ -0.6
COL4A6-205ENST00000468338 CYTH1Q15438 398 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 KIF19Q2TAC6 998 aa11.32□□□□□ -0.6
COL4A6-205ENST00000468338 POM121L1PQ3SYA9 428 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms