RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 PCYOX1Q9UHG3 505 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 PPM1HQ9ULR3 514 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 WASF2Q9Y6W5 498 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 MUC3AQ02505 3323 aa15.4■□□□□ 0.06
SNIP1-202ENST00000468040 GPR37L1O60883 481 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 ECEL1O95672 775 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 ADH1BP00325 375 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 IL1BP01584 269 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 SERPINF2P08697 491 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 NFKB1P19838 968 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 CA4P22748 312 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 SERPINA4P29622 427 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 CD68P34810 354 aaPredicted RBP15.39■□□□□ 0.05
SNIP1-202ENST00000468040 NRLP54845 237 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 SATB1Q01826 763 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 PRPSAP1Q14558 356 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 SLC14A2Q15849 920 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 NCEH1Q6PIU2 408 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 MMAAQ8IVH4 418 aaKnown RBP15.39■□□□□ 0.05
SNIP1-202ENST00000468040 KLHL7Q8IXQ5 586 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 ARRDC2Q8TBH0 407 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 GRIN3AQ8TCU5 1115 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 PRCCQ92733 491 aaPredicted RBP15.39■□□□□ 0.05
SNIP1-202ENST00000468040 SLCO2A1Q92959 643 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 PPP1R16AQ96I34 528 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 MRGPRX1Q96LB2 322 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 ZNF641Q96N77 438 aaPredicted RBP15.39■□□□□ 0.05
SNIP1-202ENST00000468040 FCRL5Q96RD9 977 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 C1QTNF1Q9BXJ1 281 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 MKRN2Q9H000 416 aaKnown RBP15.39■□□□□ 0.05
SNIP1-202ENST00000468040 PCDH9Q9HC56 1237 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 POLR3BQ9NW08 1133 aaPredicted RBP15.39■□□□□ 0.05
SNIP1-202ENST00000468040 C2orf42Q9NWW7 574 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 PAK5Q9P286 719 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 SCML1Q9UN30 329 aa15.39■□□□□ 0.05
SNIP1-202ENST00000468040 FAM86C2PA6NEL3 165 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 LAMTOR5O43504 91 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 SOCS5O75159 536 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 LEFTY1O75610 366 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 GJB3O75712 270 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 ANXA9O76027 345 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 CTSLP07711 333 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 GABRG2P18507 467 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 NDUFV2P19404 249 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 C5AR1P21730 350 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 AVPR2P30518 371 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 PSMD8P48556 350 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 RPS14P62263 151 aaKnown RBP15.38■□□□□ 0.05
SNIP1-202ENST00000468040 BCL2L1Q07817 233 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 NIPAL4Q0D2K0 466 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 SFSWAPQ12872 951 aaKnown RBP15.38■□□□□ 0.05
SNIP1-202ENST00000468040 CST6Q15828 149 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 PARP6Q2NL67 630 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 ARSIQ5FYB1 569 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 TMEM31Q5JXX7 168 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 CFAP58Q5T655 872 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 GDPD4Q6W3E5 623 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 SYDE1Q6ZW31 735 aaPredicted RBP15.38■□□□□ 0.05
SNIP1-202ENST00000468040 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNIP1-202ENST00000468040 CEP112Q8N8E3 955 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 DTWD2Q8NBA8 298 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 PIP4K2CQ8TBX8 421 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 CCHCR1Q8TD31 782 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 HMGB4Q8WW32 186 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 ERLEC1Q96DZ1 483 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 SIPA1Q96FS4 1042 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 HHIPQ96QV1 700 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 C11orf16Q9NQ32 467 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 DYRK4Q9NR20 520 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 PRMT8Q9NR22 394 aaPredicted RBP15.38■□□□□ 0.05
SNIP1-202ENST00000468040 VPS45Q9NRW7 570 aa15.38■□□□□ 0.05
SNIP1-202ENST00000468040 BCCIPQ9P287 314 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNIP1-202ENST00000468040 AAR2Q9Y312 384 aaKnown RBP15.38■□□□□ 0.05
SNIP1-202ENST00000468040 A0A0C4DFX4 3053 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 A0A1W2PQ67 120 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 GOLGA6CA6NDK9 693 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 GOLGA6BA6NDN3 693 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 KPNA3O00505 521 aaPredicted RBP15.37■□□□□ 0.05
SNIP1-202ENST00000468040 DNTTP04053 509 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 UGT2B4P06133 528 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 GOLGA6DP0CG33 693 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 ITGB7P26010 798 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 HOXA6P31267 233 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 GKP32189 559 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 CD86P42081 329 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 SKOR1P84550 965 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 DR1Q01658 176 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 C2orf54Q08AI8 447 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 CCDC15Q0P6D6 951 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 DHX34Q14147 1143 aaKnown RBP15.37■□□□□ 0.05
SNIP1-202ENST00000468040 PPP1R7Q15435 360 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 TTC31Q49AM3 519 aaPredicted RBP15.37■□□□□ 0.05
SNIP1-202ENST00000468040 ZNF805Q5CZA5 627 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 ANO7Q6IWH7 933 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 KIAA1324Q6UXG2 1013 aaKnown RBP15.37■□□□□ 0.05
SNIP1-202ENST00000468040 RASSF3Q86WH2 238 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 C1orf210Q8IVY1 113 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 PGBD3Q8N328 593 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 MDGA1Q8NFP4 955 aa15.37■□□□□ 0.05
SNIP1-202ENST00000468040 HCAR2Q8TDS4 363 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms