RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 TPRG1LQ5T0D9 272 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 FAM72AQ5TYM5 149 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 FAM72DQ6L9T8 149 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 FAM72BQ86X60 149 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 LSMEM2Q8N112 164 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 ZNF843Q8N446 348 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 ZNF248Q8NDW4 579 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 OR2AP1Q8NGE2 309 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 SLC30A5Q8TAD4 765 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 GPT2Q8TD30 523 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 LMX1AQ8TE12 382 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 ASB12Q8WXK4 309 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 TBC1D31Q96DN5 1066 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 ARHGEF26Q96DR7 871 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 NAF1Q96HR8 494 aaKnown RBP17.53■□□□□ 0.4
TRIM56-203ENST00000467847 C11orf70Q9BRQ4 267 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 MAGEH1Q9H213 219 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 CFAP46Q8IYW2 2715 aa17.53■□□□□ 0.4
TRIM56-203ENST00000467847 ZNF462Q96JM2 2506 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 RP1P56715 2156 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 TEX51A0A1B0GUA7 166 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 CPED1A4D0V7 1026 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 C2CD4BA6NLJ0 364 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 SPINT1O43278 529 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 RAMP2O60895 175 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 LRIG2O94898 1065 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 GJB6O95452 261 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 POP4O95707 220 aaKnown RBP17.52■□□□□ 0.4
TRIM56-203ENST00000467847 UGT2B4P06133 528 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 PLEKP08567 350 aaPredicted RBP17.52■□□□□ 0.4
TRIM56-203ENST00000467847 PTPN9P43378 593 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 LSSP48449 732 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 FMO1Q01740 532 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 MYLK3Q32MK0 819 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 STRADAQ7RTN6 431 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 ZNF354CQ86Y25 554 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 CCDC185Q8N715 623 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 DENND6BQ8NEG7 585 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 JOSD2Q8TAC2 188 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 HIC2Q96JB3 615 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 KLHL32Q96NJ5 620 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 OSBPL1AQ9BXW6 950 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 MAGEB5Q9BZ81 275 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 NUP62CLQ9H1M0 184 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 GANQ9H2C0 597 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 POLR1BQ9H9Y6 1135 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 NEU3Q9UQ49 428 aa17.52■□□□□ 0.4
TRIM56-203ENST00000467847 DXOO77932 396 aaKnown RBP17.51■□□□□ 0.39
TRIM56-203ENST00000467847 CHRNB2P17787 502 aa17.51■□□□□ 0.39
TRIM56-203ENST00000467847 TGM2P21980 687 aa17.51■□□□□ 0.39
TRIM56-203ENST00000467847 KLK7P49862 253 aa17.51■□□□□ 0.39
TRIM56-203ENST00000467847 THOP1P52888 689 aa17.51■□□□□ 0.39
TRIM56-203ENST00000467847 HDAC4P56524 1084 aa17.51■□□□□ 0.39
TRIM56-203ENST00000467847 PFN3P60673 137 aa17.51■□□□□ 0.39
TRIM56-203ENST00000467847 POLR2FP61218 127 aaKnown RBP17.51■□□□□ 0.39
TRIM56-203ENST00000467847 CFHR1Q03591 330 aa17.51■□□□□ 0.39
TRIM56-203ENST00000467847 EIF2B5Q13144 721 aaKnown RBP17.51■□□□□ 0.39
TRIM56-203ENST00000467847 ATMQ13315 3056 aa17.51■□□□□ 0.39
TRIM56-203ENST00000467847 LRRC73Q5JTD7 316 aa17.51■□□□□ 0.39
TRIM56-203ENST00000467847 ATXN7L2Q5T6C5 722 aaPredicted RBP17.51■□□□□ 0.39
TRIM56-203ENST00000467847 GUSBP11Q6P575 273 aa17.51■□□□□ 0.39
TRIM56-203ENST00000467847 TRIM72Q6ZMU5 477 aa17.51■□□□□ 0.39
TRIM56-203ENST00000467847 EFL1Q7Z2Z2 1120 aaKnown RBP17.51■□□□□ 0.39
TRIM56-203ENST00000467847 FAM172AQ8WUF8 416 aa17.51■□□□□ 0.39
TRIM56-203ENST00000467847 BTN2A2Q8WVV5 523 aa17.51■□□□□ 0.39
TRIM56-203ENST00000467847 IL12RB2Q99665 862 aa17.51■□□□□ 0.39
TRIM56-203ENST00000467847 FAM207AQ9NSI2 230 aaPredicted RBP17.51■□□□□ 0.39
TRIM56-203ENST00000467847 SALL4Q9UJQ4 1053 aa17.51■□□□□ 0.39
TRIM56-203ENST00000467847 COL27A1Q8IZC6 1860 aaPredicted RBP17.5■□□□□ 0.39
TRIM56-203ENST00000467847 RIOK3O14730 519 aaKnown RBP17.5■□□□□ 0.39
TRIM56-203ENST00000467847 TPP1O14773 563 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 BUB1O43683 1085 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 KDELR3O43731 214 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 TMCC1O94876 653 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 SOX5P35711 763 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 ERVPABLB-1P60509 514 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 PTK2BQ14289 1009 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 NR0B2Q15466 257 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 ISXQ2M1V0 245 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 CT47A1Q5JQC4 288 aaPredicted RBP17.5■□□□□ 0.39
TRIM56-203ENST00000467847 BROXQ5VW32 411 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 GDPD4Q6W3E5 623 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 TTC7BQ86TV6 843 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 VPS36Q86VN1 386 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 RBFAQ8N0V3 343 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 CENPIQ92674 756 aaPredicted RBP17.5■□□□□ 0.39
TRIM56-203ENST00000467847 VOPP1Q96AW1 172 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 CENPTQ96BT3 561 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 GDAP1L1Q96MZ0 367 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 C1QTNF7Q9BXJ2 289 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 VPS16Q9H269 839 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 NLRC4Q9NPP4 1024 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 SPASTQ9UBP0 616 aa17.5■□□□□ 0.39
TRIM56-203ENST00000467847 APOBEC3BQ9UH17 382 aaKnown RBP17.5■□□□□ 0.39
TRIM56-203ENST00000467847 ZSCAN5CA6NGD5 496 aaPredicted RBP17.49■□□□□ 0.39
TRIM56-203ENST00000467847 AREL1O15033 823 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 LZTS3O60299 673 aaPredicted RBP17.49■□□□□ 0.39
TRIM56-203ENST00000467847 MMP20O60882 483 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 TPM2P07951 284 aa17.49■□□□□ 0.39
TRIM56-203ENST00000467847 KRT3P12035 628 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms