RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 APOC2P02655 101 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 UGT2B4P06133 528 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 IGHV4-34P06331 123 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 PTMAP06454 111 aaKnown RBP11.19□□□□□ -0.62
MSH5-212ENST00000467319 PYGMP11217 842 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 TGM1P22735 817 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 MPLP40238 635 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 MMP13P45452 471 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 MAPK8P45983 427 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 NEK3P51956 506 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 CCDC173Q0VFZ6 552 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 KLF1Q13351 362 aaPredicted RBP11.19□□□□□ -0.62
MSH5-212ENST00000467319 ZNF235Q14590 738 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 GRM3Q14832 879 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 ODF2Q5BJF6 829 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 ZNF805Q5CZA5 627 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 RALGPS1Q5JS13 557 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 NCEH1Q6PIU2 408 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 ERN2Q76MJ5 926 aaKnown RBP11.19□□□□□ -0.62
MSH5-212ENST00000467319 CYP2U1Q7Z449 544 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 CCDC50Q8IVM0 306 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 REXO1L1PQ8IX06 675 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 UBL4BQ8N7F7 174 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 TRIM58Q8NG06 486 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 DNASE2BQ8WZ79 361 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 FOXJ1Q92949 421 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 ECHDC3Q96DC8 303 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 QKIQ96PU8 341 aaKnown RBP eCLIP11.19□□□□□ -0.62
MSH5-212ENST00000467319 LGMNQ99538 433 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 IL12RB2Q99665 862 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 OSBPL8Q9BZF1 889 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 BRD8Q9H0E9 1235 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 C6orf106Q9H6K1 298 aaPredicted RBP11.19□□□□□ -0.62
MSH5-212ENST00000467319 PREBQ9HCU5 417 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 AMACRQ9UHK6 382 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 GMEB2Q9UKD1 530 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 NCKAP1Q9Y2A7 1128 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.19□□□□□ -0.62
MSH5-212ENST00000467319 CACNA1EQ15878 2313 aa11.19□□□□□ -0.62
MSH5-212ENST00000467319 CEP250Q9BV73 2442 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 ANKRD36A6QL64 1941 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 C16orf96A6NNT2 1141 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 METTL12A8MUP2 240 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 PPP1R12AO14974 1030 aaPredicted RBP11.18□□□□□ -0.62
MSH5-212ENST00000467319 AREL1O15033 823 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 AP1G1O43747 822 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 SOCS5O75159 536 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 NDUFS2O75306 463 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 PIGNO95427 931 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 ADRB3P13945 408 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 ITPKAP23677 461 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 ABL2P42684 1182 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 DHPSP49366 369 aaPredicted RBP11.18□□□□□ -0.62
MSH5-212ENST00000467319 RENBPP51606 427 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 CCR5P51681 352 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 PPP2CBP62714 309 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 PPP2CAP67775 309 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 ZBTB17Q13105 803 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 NOMO1Q15155 1222 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 LLGL1Q15334 1064 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 MEI1Q5TIA1 1274 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 MARC1Q5VT66 337 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 KAZNQ674X7 775 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 KIAA0895LQ68EN5 471 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 AADACL2Q6P093 401 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 GDPD4Q6W3E5 623 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 ARMCX6Q7L4S7 300 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 SRLQ86TD4 932 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 TRIM69Q86WT6 500 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 ZSWIM9Q86XI8 627 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 CCDC13Q8IYE1 715 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 RYBPQ8N488 228 aaPredicted RBP11.18□□□□□ -0.62
MSH5-212ENST00000467319 CNTD1Q8N815 330 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 C1orf216Q8TAB5 229 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 GANCQ8TET4 914 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 LRRN4Q8WUT4 740 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 ZNF641Q96N77 438 aaPredicted RBP11.18□□□□□ -0.62
MSH5-212ENST00000467319 ALS2CR12Q96Q35 445 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 NUDCD1Q96RS6 583 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 MAK16Q9BXY0 300 aaKnown RBP11.18□□□□□ -0.62
MSH5-212ENST00000467319 PARD6AQ9NPB6 346 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 NCDNQ9UBB6 729 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 SAE1Q9UBE0 346 aaPredicted RBP11.18□□□□□ -0.62
MSH5-212ENST00000467319 PILRBQ9UKJ0 227 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 TPX2Q9ULW0 747 aaKnown RBP11.18□□□□□ -0.62
MSH5-212ENST00000467319 SDK1Q7Z5N4 2213 aa11.18□□□□□ -0.62
MSH5-212ENST00000467319 PLXNA2O75051 1894 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 ATXN2Q99700 1313 aaKnown RBP11.17□□□□□ -0.62
MSH5-212ENST00000467319 LRRC72A6NJI9 287 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 KCNK1O00180 336 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 TRAFD1O14545 582 aaPredicted RBP11.17□□□□□ -0.62
MSH5-212ENST00000467319 HTRA2O43464 458 aaPredicted RBP11.17□□□□□ -0.62
MSH5-212ENST00000467319 HLA-DQB2P05538 268 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 CCNB1P14635 433 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 HOXD11P31277 338 aaPredicted RBP11.17□□□□□ -0.62
MSH5-212ENST00000467319 DPP6P42658 865 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 RAD51Q06609 339 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 ZNF211Q13398 564 aaPredicted RBP11.17□□□□□ -0.62
MSH5-212ENST00000467319 IHHQ14623 411 aa11.17□□□□□ -0.62
MSH5-212ENST00000467319 TMEM259Q4ZIN3 620 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms