RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 IL4RP24394 825 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 ADRA1BP35368 520 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 GRIK1P39086 918 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 EIF2DP41214 584 aaKnown RBP14.12□□□□□ -0.15
HDAC6-215ENST00000465457 ABCG1P45844 678 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 SLC5A3P53794 718 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 CACNA2D1P54289 1103 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 MMRN1Q13201 1228 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 TRIP13Q15645 432 aaPredicted RBP14.12□□□□□ -0.15
HDAC6-215ENST00000465457 BRMS1LQ5PSV4 323 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 CEP85LQ5SZL2 805 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 DARS2Q6PI48 645 aaKnown RBP14.12□□□□□ -0.15
HDAC6-215ENST00000465457 PPP1R21Q6ZMI0 780 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 BHLHA9Q7RTU4 235 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 FAM131BQ86XD5 332 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 ETFBKMTQ8IXQ9 262 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 PPIL6Q8IXY8 311 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 ZNF843Q8N446 348 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 CCDC185Q8N715 623 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 PQLC3Q8N755 202 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 FAM76AQ8TAV0 307 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 FAM118BQ9BPY3 351 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 TMEM109Q9BVC6 243 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 TMEM30AQ9NV96 361 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 GPATCH2LQ9NWQ4 482 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 DDIT4Q9NX09 232 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 PAK5Q9P286 719 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 RAI2Q9Y5P3 530 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 SLCO1B1Q9Y6L6 691 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 COL6A6A6NMZ7 2263 aa14.12□□□□□ -0.15
HDAC6-215ENST00000465457 H7C0C1 242 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 PYCARD-AS1I3L0S3 204 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 POLR3GO15318 223 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-215ENST00000465457 TP73O15350 636 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 EIF3HO15372 352 aaKnown RBP eCLIP14.11□□□□□ -0.158e-6■■□□□ 11.4
HDAC6-215ENST00000465457 TULP3O75386 442 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 RTN3O95197 1032 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-215ENST00000465457 IFNB1P01574 187 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 FYNP06241 537 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 IVLP07476 585 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 ATP5OP48047 213 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 CXCR3P49682 368 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 CLDN6P56747 220 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 SLC7A9P82251 487 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 ZNF844Q08AG5 666 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 NME3Q13232 169 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 CA9Q16790 459 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 RAB6CQ53S08 254 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 AGBL2Q5U5Z8 902 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 SYPL2Q5VXT5 272 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 BSPRYQ5W0U4 402 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 ARFGAP2Q8N6H7 521 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 RNF139Q8WU17 664 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 WBP2Q969T9 261 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 ZNF419Q96HQ0 510 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-215ENST00000465457 KCTD15Q96SI1 283 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-215ENST00000465457 ROPN1BQ9BZX4 212 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-215ENST00000465457 BRD8Q9H0E9 1235 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 RAB6CQ9H0N0 254 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 ROPN1Q9HAT0 212 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-215ENST00000465457 PIGVQ9NUD9 493 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 NAALADL1Q9UQQ1 740 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 SCML2Q9UQR0 700 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 NFS1Q9Y697 457 aa14.11□□□□□ -0.15
HDAC6-215ENST00000465457 TBC1D3BA6NDS4 549 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 ZNF840PA6NDX5 716 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 RIPK2O43353 540 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 STK10O94804 968 aaKnown RBP14.1□□□□□ -0.15
HDAC6-215ENST00000465457 ADH1CP00326 375 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 OAS1P00973 400 aaKnown RBP14.1□□□□□ -0.15
HDAC6-215ENST00000465457 ABHD2P08910 425 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 TNFRSF4P43489 277 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 VPS41P49754 854 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 PSEN1P49768 467 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 YWHAGP61981 247 aaKnown RBP eCLIP14.1□□□□□ -0.15
HDAC6-215ENST00000465457 MTA1Q13330 715 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 CCDC157Q569K6 752 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 SLC45A4Q5BKX6 768 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 ACBD5Q5T8D3 534 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-215ENST00000465457 RNASEH2BQ5TBB1 312 aaKnown RBP14.1□□□□□ -0.15
HDAC6-215ENST00000465457 BTBD8Q5XKL5 378 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 PCSK4Q6UW60 755 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 CENPUQ71F23 418 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 CCDC25Q86WR0 208 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 NUP93Q8N1F7 819 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 TERB1Q8NA31 727 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 ZFRQ96KR1 1074 aaKnown RBP14.1□□□□□ -0.15
HDAC6-215ENST00000465457 ATP6V1G3Q96LB4 118 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 QKIQ96PU8 341 aaKnown RBP eCLIP14.1□□□□□ -0.15
HDAC6-215ENST00000465457 EPAS1Q99814 870 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 CCDC77Q9BR77 488 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 GAREM1Q9H706 876 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 PPCSQ9HAB8 311 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 TMBIM4Q9HC24 238 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 PSD3Q9NYI0 1048 aa14.1□□□□□ -0.15
HDAC6-215ENST00000465457 CWC15Q9P013 229 aaKnown RBP14.1□□□□□ -0.15
HDAC6-215ENST00000465457 KIAA1522Q9P206 1035 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-215ENST00000465457 FARP1Q9Y4F1 1045 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-215ENST00000465457 COL5A1P20908 1838 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-215ENST00000465457 SPTA1P02549 2419 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms