RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 KDELR3O43731 214 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 CSO75390 466 aaKnown RBP23.11■■□□□ 1.29
USP42-205ENST00000465073 DXOO77932 396 aaKnown RBP23.11■■□□□ 1.29
USP42-205ENST00000465073 TPM2P07951 284 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 KRT3P12035 628 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 JUNDP17535 347 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 LSSP48449 732 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 GPR155Q7Z3F1 870 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 SPACA3Q8IXA5 215 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 ZNF248Q8NDW4 579 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 ENOX1Q8TC92 643 aaKnown RBP23.11■■□□□ 1.29
USP42-205ENST00000465073 BTN2A2Q8WVV5 523 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 VPS16Q9H269 839 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 KLF15Q9UIH9 416 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 SALL4Q9UJQ4 1053 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 ITM2BQ9Y287 266 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 BPTFQ12830 3046 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 TPP1O14773 563 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 USP12O75317 370 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 MPOP05164 745 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 UGT2B4P06133 528 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 HDAC4P56524 1084 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 JAM2P57087 298 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 PTK2BQ14289 1009 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 CCDC185Q8N715 623 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 FAM172AQ8WUF8 416 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 SLC39A7Q92504 469 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 NTAN1Q96AB6 310 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 VOPP1Q96AW1 172 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 CENPTQ96BT3 561 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 KLHL32Q96NJ5 620 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 MAGEB5Q9BZ81 275 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 POLR1BQ9H9Y6 1135 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 FAM207AQ9NSI2 230 aaPredicted RBP23.11■■□□□ 1.29
USP42-205ENST00000465073 GGT7Q9UJ14 662 aa23.11■■□□□ 1.29
USP42-205ENST00000465073 GCN1Q92616 2671 aaKnown RBP23.11■■□□□ 1.29
USP42-205ENST00000465073 AREL1O15033 823 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 SPINT1O43278 529 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 LZTS3O60299 673 aaPredicted RBP23.1■■□□□ 1.29
USP42-205ENST00000465073 UNGP13051 313 aaPredicted RBP23.1■■□□□ 1.29
USP42-205ENST00000465073 PCBP4P57723 403 aaKnown RBP23.1■■□□□ 1.29
USP42-205ENST00000465073 GABREP78334 506 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 RAD51Q06609 339 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 C19orf57Q0VDD7 668 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 PTP4A2Q12974 167 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 EIF2B5Q13144 721 aaKnown RBP23.1■■□□□ 1.29
USP42-205ENST00000465073 TPRG1LQ5T0D9 272 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 FKBP15Q5T1M5 1219 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 GDPD4Q6W3E5 623 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 LEKR1Q6ZMV7 388 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 TTC7BQ86TV6 843 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 LMX1AQ8TE12 382 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 CASKIN2Q8WXE0 1202 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 GRAMD1AQ96CP6 724 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 HIC2Q96JB3 615 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 GDAP1L1Q96MZ0 367 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 LGMNQ99538 433 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 NLRC4Q9NPP4 1024 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 SPASTQ9UBP0 616 aa23.1■■□□□ 1.29
USP42-205ENST00000465073 TEX51A0A1B0GUA7 166 aa23.09■■□□□ 1.29
USP42-205ENST00000465073 CPED1A4D0V7 1026 aa23.09■■□□□ 1.29
USP42-205ENST00000465073 BUB1O43683 1085 aa23.09■■□□□ 1.29
USP42-205ENST00000465073 GJB6O95452 261 aa23.09■■□□□ 1.29
USP42-205ENST00000465073 RFC1P35251 1148 aaPredicted RBP23.09■■□□□ 1.29
USP42-205ENST00000465073 STAT1P42224 750 aa23.09■■□□□ 1.29
USP42-205ENST00000465073 NSFP46459 744 aaKnown RBP23.09■■□□□ 1.29
USP42-205ENST00000465073 KLK7P49862 253 aa23.09■■□□□ 1.29
USP42-205ENST00000465073 THOP1P52888 689 aa23.09■■□□□ 1.29
USP42-205ENST00000465073 GSCP56915 257 aaPredicted RBP23.09■■□□□ 1.29
USP42-205ENST00000465073 ERVPABLB-1P60509 514 aa23.09■■□□□ 1.29
USP42-205ENST00000465073 CDKN3Q16667 212 aa23.09■■□□□ 1.29
USP42-205ENST00000465073 DEFB133Q30KQ1 61 aa23.09■■□□□ 1.29
USP42-205ENST00000465073 ATXN7L2Q5T6C5 722 aaPredicted RBP23.09■■□□□ 1.29
USP42-205ENST00000465073 CDKAL1Q5VV42 579 aa23.09■■□□□ 1.29
USP42-205ENST00000465073 SLFN11Q7Z7L1 901 aa23.09■■□□□ 1.29
USP42-205ENST00000465073 IL12RB2Q99665 862 aa23.09■■□□□ 1.29
USP42-205ENST00000465073 C1QTNF7Q9BXJ2 289 aa23.09■■□□□ 1.29
USP42-205ENST00000465073 ADAM22Q9P0K1 906 aa23.09■■□□□ 1.29
USP42-205ENST00000465073 YPEL5P62699 121 aa23.08■■□□□ 1.29
USP42-205ENST00000465073 KRT31Q15323 416 aa23.08■■□□□ 1.29
USP42-205ENST00000465073 NR0B2Q15466 257 aa23.08■■□□□ 1.29
USP42-205ENST00000465073 ISXQ2M1V0 245 aa23.08■■□□□ 1.29
USP42-205ENST00000465073 INO80DQ53TQ3 878 aaPredicted RBP23.08■■□□□ 1.29
USP42-205ENST00000465073 ZNF354CQ86Y25 554 aa23.08■■□□□ 1.29
USP42-205ENST00000465073 RTL3Q8N8U3 475 aaKnown RBP23.08■■□□□ 1.29
USP42-205ENST00000465073 TPCN2Q8NHX9 752 aa23.08■■□□□ 1.29
USP42-205ENST00000465073 TBATAQ96M53 351 aa23.08■■□□□ 1.29
USP42-205ENST00000465073 PCDHB18PQ96TA0 734 aa23.08■■□□□ 1.29
USP42-205ENST00000465073 SELENOOQ9BVL4 669 aa23.08■■□□□ 1.29
USP42-205ENST00000465073 TTYH3Q9C0H2 523 aa23.08■■□□□ 1.29
USP42-205ENST00000465073 MFHAS1Q9Y4C4 1052 aa23.08■■□□□ 1.29
USP42-205ENST00000465073 EME2A4GXA9 379 aaPredicted RBP23.07■■□□□ 1.28
USP42-205ENST00000465073 TOR1BO14657 336 aa23.07■■□□□ 1.28
USP42-205ENST00000465073 EPHB6O15197 1021 aa23.07■■□□□ 1.28
USP42-205ENST00000465073 TMCC1O94876 653 aa23.07■■□□□ 1.28
USP42-205ENST00000465073 CALB1P05937 261 aa23.07■■□□□ 1.28
USP42-205ENST00000465073 GPD1P21695 349 aa23.07■■□□□ 1.28
USP42-205ENST00000465073 GUSBP11Q6P575 273 aa23.07■■□□□ 1.28
USP42-205ENST00000465073 WDR59Q6PJI9 974 aa23.07■■□□□ 1.28
USP42-205ENST00000465073 EFL1Q7Z2Z2 1120 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms