RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SRLQ86TD4 932 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 RGL4Q8IZJ4 473 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 RYBPQ8N488 228 aaPredicted RBP17.92■□□□□ 0.46
VPS52-214ENST00000463486 ATPAF2Q8N5M1 289 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 CEP76Q8TAP6 659 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 LRRN4Q8WUT4 740 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 MAML1Q92585 1016 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 KLHL32Q96NJ5 620 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 OSBPL1AQ9BXW6 950 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 PCDHA3Q9Y5H8 950 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 FADS3Q9Y5Q0 445 aa17.92■□□□□ 0.46
VPS52-214ENST00000463486 DOCK9Q9BZ29 2069 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 CACNA1AO00555 2505 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 TBC1D3DA0A087WVF3 549 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 TBC1D3IA0A087WXS9 549 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 TBC1D3EA0A087X179 549 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 TBC1D3KA0A087X1G2 549 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 A0A1W2PPC4 97 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 TSPAN11A1L157 253 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 TBC1D3FA6NER0 549 aaPredicted RBP17.91■□□□□ 0.46
VPS52-214ENST00000463486 TBC1D3LB9A6J9 549 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 CDX4O14627 284 aaPredicted RBP17.91■□□□□ 0.46
VPS52-214ENST00000463486 ARHGAP6O43182 974 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 TBC1D3HP0C7X1 549 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 ADRB3P13945 408 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 CTNNA1P35221 906 aaKnown RBP17.91■□□□□ 0.46
VPS52-214ENST00000463486 ABL2P42684 1182 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 NEK3P51956 506 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 LMNB2Q03252 620 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 KIF5AQ12840 1032 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 IHHQ14623 411 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 TBC1D3GQ6DHY5 549 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 TBC1D3CQ6IPX1 549 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 SPOCD1Q6ZMY3 1216 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 KIAA1328Q86T90 577 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 NT5DC3Q86UY8 548 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 TRIM69Q86WT6 500 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 ZSWIM9Q86XI8 627 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 TBC1D3Q8IZP1 549 aaPredicted RBP17.91■□□□□ 0.46
VPS52-214ENST00000463486 ZCCHC9Q8N567 271 aaKnown RBP17.91■□□□□ 0.46
VPS52-214ENST00000463486 KIAA1524Q8TCG1 905 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 PPP1R16AQ96I34 528 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 OLFM3Q96PB7 478 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 PREBQ9HCU5 417 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 FSCN3Q9NQT6 498 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 DKK3Q9UBP4 350 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 SEPT3Q9UH03 358 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 SLC6A14Q9UN76 642 aa17.91■□□□□ 0.46
VPS52-214ENST00000463486 A0A1B0GTW7 788 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 TTC24A2A3L6 582 aaPredicted RBP17.9■□□□□ 0.46
VPS52-214ENST00000463486 AREL1O15033 823 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 MATN3O15232 486 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 AP1G1O43747 822 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 PIGNO95427 931 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 KRT10P13645 584 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 TIMP2P16035 220 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 CCNCP24863 283 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 CTNNA2P26232 953 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 HNRNPDQ14103 355 aaKnown RBP17.9■□□□□ 0.46
VPS52-214ENST00000463486 IFI16Q16666 785 aaKnown RBP17.9■□□□□ 0.46
VPS52-214ENST00000463486 TMEM259Q4ZIN3 620 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 ZFYVE27Q5T4F4 411 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 NEK5Q6P3R8 708 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 NPNTQ6UXI9 565 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 CAMK1DQ8IU85 385 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 RCOR2Q8IZ40 523 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 CCDC112Q8NEF3 446 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 EXD1Q8NHP7 514 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 HCAR2Q8TDS4 363 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 ALG3Q92685 438 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 ECHDC3Q96DC8 303 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 MGME1Q9BQP7 344 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 HERPUD2Q9BSE4 406 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 CINPQ9BW66 212 aaPredicted RBP17.9■□□□□ 0.46
VPS52-214ENST00000463486 MIR1-1HGQ9H1L0 117 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 TM9SF3Q9HD45 589 aa17.9■□□□□ 0.46
VPS52-214ENST00000463486 ZFR2Q9UPR6 939 aaKnown RBP17.9■□□□□ 0.46
VPS52-214ENST00000463486 hCG_1818297A0A087WSY0 165 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 MACROD2A1Z1Q3 448 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 PRR5-ARHGAP8B1AHC4 643 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 TRAFD1O14545 582 aaPredicted RBP17.89■□□□□ 0.45
VPS52-214ENST00000463486 APOL1O14791 398 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 BCAT2O15382 392 aaPredicted RBP17.89■□□□□ 0.45
VPS52-214ENST00000463486 RNGTTO60942 597 aaKnown RBP17.89■□□□□ 0.45
VPS52-214ENST00000463486 ZRANB2O95218 330 aaKnown RBP eCLIP17.89■□□□□ 0.45
VPS52-214ENST00000463486 ITIH2P19823 946 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 ARHGAP8P85298 464 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 RAD51Q06609 339 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 PPIDQ08752 370 aaKnown RBP17.89■□□□□ 0.45
VPS52-214ENST00000463486 ZNF284Q2VY69 593 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 RABEPKQ7Z6M1 372 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 SPOCK2Q92563 424 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 HDAC11Q96DB2 347 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 ZNF641Q96N77 438 aaPredicted RBP17.89■□□□□ 0.45
VPS52-214ENST00000463486 TUBGCP5Q96RT8 1024 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 LGMNQ99538 433 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 SUV39H2Q9H5I1 410 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 DYRK4Q9NR20 520 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 DLL3Q9NYJ7 618 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 SAE1Q9UBE0 346 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms