RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 FAM47DPA6NHR8 397 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 CDX4O14627 284 aaPredicted RBP13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 VILLO15195 856 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 TSPAN6O43657 245 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 GDF9O60383 454 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 CER1O95813 267 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 ZFXP17010 805 aaPredicted RBP13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 MX2P20592 715 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 KDELR1P24390 212 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 AP1S1P61966 158 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 GALNT2Q10471 571 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 OVGP1Q12889 678 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 SLC14A1Q13336 389 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 TIGD7Q6NT04 549 aaPredicted RBP13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 LEKR1Q6ZMV7 388 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 IQCHQ86VS3 1027 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 HORMAD1Q86X24 394 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 ASB12Q8WXK4 309 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 PSKH2Q96QS6 385 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 ETNK2Q9NVF9 386 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 AMACRQ9UHK6 382 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 CEP250Q9BV73 2442 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 A0A1W2PQ67 120 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 SOWAHDA6NJG2 315 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 MAGEC1O60732 1142 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 GJC1P36383 396 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 NOP2P46087 812 aaKnown RBP13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 LBRQ14739 615 aaKnown RBP13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 ATXN7L2Q5T6C5 722 aaPredicted RBP13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 NCBP2-AS2Q69YL0 99 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 PARS2Q7L3T8 475 aaKnown RBP13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 SRLQ86TD4 932 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 PCDH19Q8TAB3 1148 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 VOPP1Q96AW1 172 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 TSGA13Q96PP4 275 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 RXFP3Q9NSD7 469 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 FADS3Q9Y5Q0 445 aa13.24□□□□□ -0.29
R3HDM1-213ENST00000463230 GON4LQ3T8J9 2241 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 PLXNA2O75051 1894 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 C16orf96A6NNT2 1141 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 TM4SF5O14894 197 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 PJA2O43164 708 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 SPOPO43791 374 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 MAFKO60675 156 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 OPHN1O60890 802 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 CD48P09326 243 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 PPP2CBP62714 309 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 RPS21P63220 83 aaKnown RBP13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 PPP2CAP67775 309 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 GRIK2Q13002 908 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 MMRN1Q13201 1228 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 POM121L1PQ3SYA9 428 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 ATP13A4Q4VNC1 1196 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 ZFYVE27Q5T4F4 411 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 BRAT1Q6PJG6 821 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 CPNE8Q86YQ8 564 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 FEM1CQ96JP0 617 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 ZNF830Q96NB3 372 aaPredicted RBP13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 RNF157Q96PX1 679 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 ATP13A3Q9H7F0 1226 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 PCDHGB2Q9Y5G2 931 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 LRRD1A4D1F6 860 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 C4orf47A7E2U8 309 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 PRAMEF26H0Y7S4 382 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 PLK4O00444 970 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 BUB1BO60566 1050 aaPredicted RBP13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 PEX11BO96011 259 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 UGT2B4P06133 528 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 COMTP21964 271 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 GARSP41250 739 aaKnown RBP13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 VAV2P52735 878 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 ZNF235Q14590 738 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 IFI16Q16666 785 aaKnown RBP13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 TMEM259Q4ZIN3 620 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 ODF2Q5BJF6 829 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 TMEM139Q8IV31 216 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 MINDY1Q8N5J2 469 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 MFSD2AQ8NA29 543 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 UBE2Q2Q8WVN8 375 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 KLHL32Q96NJ5 620 aa13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.23□□□□□ -0.29
R3HDM1-213ENST00000463230 C3orf70A6NLC5 250 aaPredicted RBP13.22□□□□□ -0.29
R3HDM1-213ENST00000463230 YKT6O15498 198 aa13.22□□□□□ -0.29
R3HDM1-213ENST00000463230 MFSD11O43934 449 aa13.22□□□□□ -0.29
R3HDM1-213ENST00000463230 KRT1P04264 644 aa13.22□□□□□ -0.29
R3HDM1-213ENST00000463230 CSRP1P21291 193 aaKnown RBP13.22□□□□□ -0.29
R3HDM1-213ENST00000463230 CES1P23141 567 aa13.22□□□□□ -0.29
R3HDM1-213ENST00000463230 CCNCP24863 283 aa13.22□□□□□ -0.29
R3HDM1-213ENST00000463230 SERPINA4P29622 427 aa13.22□□□□□ -0.29
R3HDM1-213ENST00000463230 C21orf59P57076 290 aa13.22□□□□□ -0.29
R3HDM1-213ENST00000463230 FOXK2Q01167 660 aa13.22□□□□□ -0.29
R3HDM1-213ENST00000463230 ELP6Q0PNE2 266 aa13.22□□□□□ -0.29
R3HDM1-213ENST00000463230 HNRNPDQ14103 355 aaKnown RBP13.22□□□□□ -0.29
R3HDM1-213ENST00000463230 SLC9A4Q6AI14 798 aa13.22□□□□□ -0.29
R3HDM1-213ENST00000463230 RAD9BQ6WBX8 426 aa13.22□□□□□ -0.29
R3HDM1-213ENST00000463230 ARHGAP36Q6ZRI8 547 aa13.22□□□□□ -0.29
R3HDM1-213ENST00000463230 DGLUCYQ7Z3D6 616 aa13.22□□□□□ -0.29
R3HDM1-213ENST00000463230 OXR1Q8N573 874 aa13.22□□□□□ -0.29
R3HDM1-213ENST00000463230 TEX26Q8N6G2 289 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms