RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 ARHGEF3Q9NR81 526 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 PAK5Q9P286 719 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 PHTF1Q9UMS5 762 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 SHROOM3Q8TF72 1996 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 A0A0D9SEW6 157 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 DFFAO00273 331 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 RAMP2O60895 175 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 RPA3P35244 121 aaPredicted RBP18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 MSH2P43246 934 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 TDGQ13569 410 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 KCNJ11Q14654 390 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 POLD3Q15054 466 aaPredicted RBP18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 MSS51Q4VC12 460 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 C3orf62Q6ZUJ4 267 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 SETD3Q86TU7 594 aaPredicted RBP18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 ZNF354CQ86Y25 554 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 UMODL1-AS1Q8N2C9 162 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 LZTR1Q8N653 840 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 MZB1Q8WU39 189 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 LRRN4Q8WUT4 740 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 DCAKDQ8WVC6 231 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 KLHL29Q96CT2 875 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 ASB2Q96Q27 587 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 PAIP2Q9BPZ3 127 aaKnown RBP18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 SLC39A8Q9C0K1 460 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 RETREG1Q9H6L5 497 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 DTLQ9NZJ0 730 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 TBC1D30Q9Y2I9 924 aa18.32■□□□□ 0.52
ATPAF2-202ENST00000462733 CHD5Q8TDI0 1954 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 GOLGA8MH3BSY2 632 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 TRIM24O15164 1050 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 FAM155BO75949 473 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 BMP1P13497 986 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 CD70P32970 193 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 GJA4P35212 333 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 MAGEA6P43360 314 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 SLC6A11P48066 632 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 SOX9P48436 509 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 LMAN2Q12907 356 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 GAB4Q2WGN9 574 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 HP1BP3Q5SSJ5 553 aaPredicted RBP18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 RNF219Q5W0B1 726 aaPredicted RBP18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 DARS2Q6PI48 645 aaKnown RBP18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 TBC1D1Q86TI0 1168 aaPredicted RBP18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 ARHGAP12Q8IWW6 846 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 C4orf33Q8N1A6 199 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 FIBINQ8TAL6 211 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 HMCESQ96FZ2 354 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 WDR83Q9BRX9 315 aaKnown RBP18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 MUC3BQ9H195 1237 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 NOD2Q9HC29 1040 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 CD248Q9HCU0 757 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 ABCB8Q9NUT2 735 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 COL4A3Q01955 1670 aa18.31■□□□□ 0.52
ATPAF2-202ENST00000462733 IQANK1A0A1B0GTG1 560 aa18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 CACNG3O60359 315 aa18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 UNC5CO95185 931 aa18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 GSTA2P09210 222 aa18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 EZRP15311 586 aaKnown RBP18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 KRT4P19013 534 aa18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 MZF1P28698 734 aaPredicted RBP18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 HLA-FP30511 346 aa18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 SSTR1P30872 391 aa18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 ACVRL1P37023 503 aa18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 CSKP41240 450 aa18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 NDST2P52849 883 aa18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 BASP1P80723 227 aaKnown RBP18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 GNA12Q03113 381 aa18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 DNAJC3Q13217 504 aa18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 BBS9Q3SYG4 887 aa18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 ASTLQ6HA08 431 aaPredicted RBP18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 ZC3H18Q86VM9 953 aaKnown RBP18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 OR7D4Q8NG98 312 aa18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 RAB3IPQ96QF0 476 aaPredicted RBP18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 SPON2Q9BUD6 331 aa18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 VPS11Q9H270 941 aa18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 KIAA1522Q9P206 1035 aaPredicted RBP18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 NYNRINQ9P2P1 1898 aaKnown RBP18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 F5P12259 2224 aa18.3■□□□□ 0.52
ATPAF2-202ENST00000462733 ILVBLA1L0T0 632 aa18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 TULP3O75386 442 aa18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 NR2C2P49116 596 aa18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 PAPOLAP51003 745 aaKnown RBP18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 MGAT5Q09328 741 aa18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 SF3A3Q12874 501 aaKnown RBP eCLIP18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 SLC1A5Q15758 541 aa18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 AFMIDQ63HM1 303 aa18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 NAIF1Q69YI7 327 aaPredicted RBP18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 CAPN12Q6ZSI9 719 aa18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 FAM47EQ6ZV65 393 aa18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 ETFBKMTQ8IXQ9 262 aa18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 BANPQ8N9N5 519 aa18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 YY1AP1Q9H869 796 aa18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 A0A1W2PPM1 405 aa18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 BCLAF3A2AJT9 711 aaKnown RBP18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 ARHGAP42A6NI28 874 aa18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 HNRNPCL1O60812 293 aaKnown RBP18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 BANF1O75531 89 aa18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 WFS1O76024 890 aa18.29■□□□□ 0.52
ATPAF2-202ENST00000462733 DGKGP49619 791 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms