RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 NRP1O14786 923 aa18.64■□□□□ 0.58
HPS3-204ENST00000462030 HTRA2O43464 458 aaPredicted RBP18.64■□□□□ 0.58
HPS3-204ENST00000462030 NPHS1O60500 1241 aa18.64■□□□□ 0.58
HPS3-204ENST00000462030 JCHAINP01591 159 aa18.64■□□□□ 0.58
HPS3-204ENST00000462030 FYNP06241 537 aa18.64■□□□□ 0.58
HPS3-204ENST00000462030 AKAP5P24588 427 aa18.64■□□□□ 0.58
HPS3-204ENST00000462030 FASTKQ14296 549 aaKnown RBP18.64■□□□□ 0.58
HPS3-204ENST00000462030 AGKQ53H12 422 aa18.64■□□□□ 0.58
HPS3-204ENST00000462030 C6orf10Q5SRN2 563 aa18.64■□□□□ 0.58
HPS3-204ENST00000462030 ITPRIPL1Q6GPH6 555 aa18.64■□□□□ 0.58
HPS3-204ENST00000462030 KLHL35Q6PF15 583 aa18.64■□□□□ 0.58
HPS3-204ENST00000462030 TRIM67Q6ZTA4 783 aa18.64■□□□□ 0.58
HPS3-204ENST00000462030 OSTM1Q86WC4 334 aa18.64■□□□□ 0.58
HPS3-204ENST00000462030 FIBCD1Q8N539 461 aa18.64■□□□□ 0.58
HPS3-204ENST00000462030 RIN3Q8TB24 985 aa18.64■□□□□ 0.58
HPS3-204ENST00000462030 USP33Q8TEY7 942 aa18.64■□□□□ 0.58
HPS3-204ENST00000462030 HDAC11Q96DB2 347 aa18.64■□□□□ 0.58
HPS3-204ENST00000462030 WDR6Q9NNW5 1121 aaKnown RBP18.64■□□□□ 0.58
HPS3-204ENST00000462030 PNPLA3Q9NST1 481 aa18.64■□□□□ 0.58
HPS3-204ENST00000462030 NSMCE4AQ9NXX6 385 aa18.64■□□□□ 0.58
HPS3-204ENST00000462030 DNAJC25-GNG10A0A024R161 153 aa18.64■□□□□ 0.57
HPS3-204ENST00000462030 TCRBV3S1A0A5B6 114 aa18.64■□□□□ 0.57
HPS3-204ENST00000462030 COL6A2P12110 1019 aa18.64■□□□□ 0.57
HPS3-204ENST00000462030 STMN1P16949 149 aa18.64■□□□□ 0.57
HPS3-204ENST00000462030 C1QTNF8P60827 252 aa18.64■□□□□ 0.57
HPS3-204ENST00000462030 CHSY3Q70JA7 882 aa18.64■□□□□ 0.57
HPS3-204ENST00000462030 SULF1Q8IWU6 871 aa18.64■□□□□ 0.57
HPS3-204ENST00000462030 SLC2A13Q96QE2 648 aa18.64■□□□□ 0.57
HPS3-204ENST00000462030 DUSP16Q9BY84 665 aa18.64■□□□□ 0.57
HPS3-204ENST00000462030 MRPL46Q9H2W6 279 aaKnown RBP18.64■□□□□ 0.57
HPS3-204ENST00000462030 CYP4F12Q9HCS2 524 aa18.64■□□□□ 0.57
HPS3-204ENST00000462030 DUS2Q9NX74 493 aaKnown RBP18.64■□□□□ 0.57
HPS3-204ENST00000462030 NCKIPSDQ9NZQ3 722 aa18.64■□□□□ 0.57
HPS3-204ENST00000462030 TIPRLO75663 272 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 RECQL4O94761 1208 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 STT3AP46977 705 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 KCTD2Q14681 263 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 POU6F1Q14863 301 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 CTU1Q7Z7A3 348 aaKnown RBP18.63■□□□□ 0.57
HPS3-204ENST00000462030 B3GALNT2Q8NCR0 500 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 SPATA22Q8NHS9 363 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 HEXDCQ8WVB3 486 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 TEKT5Q96M29 485 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 LRRC4Q9HBW1 653 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 KLK14Q9P0G3 267 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 TRHDEQ9UKU6 1024 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 SARDHQ9UL12 918 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 POLR2AP24928 1970 aaKnown RBP18.63■□□□□ 0.57
HPS3-204ENST00000462030 ZNF839A8K0R7 811 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 PSMD12O00232 456 aaPredicted RBP18.63■□□□□ 0.57
HPS3-204ENST00000462030 PIRO00625 290 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 SOCS2O14508 198 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 SLC7A1P30825 629 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 TAS2R39P59534 338 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 STX5Q13190 355 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 NAPEPLDQ6IQ20 393 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 TRIM74Q86UV6 250 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 TRIM73Q86UV7 250 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 SIX6OS1Q8N1H7 587 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 FAM47BQ8NA70 645 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 APPL2Q8NEU8 664 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 SNRNP27Q8WVK2 155 aaKnown RBP18.63■□□□□ 0.57
HPS3-204ENST00000462030 TOP1MTQ969P6 601 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 PPWD1Q96BP3 646 aaKnown RBP18.63■□□□□ 0.57
HPS3-204ENST00000462030 CELF6Q96J87 481 aaKnown RBP18.63■□□□□ 0.57
HPS3-204ENST00000462030 SLC39A3Q9BRY0 314 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 SPAG4Q9NPE6 437 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 CD300AQ9UGN4 299 aa18.63■□□□□ 0.57
HPS3-204ENST00000462030 IPO11Q9UI26 975 aaKnown RBP18.63■□□□□ 0.57
HPS3-204ENST00000462030 NCAM2O15394 837 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 KCNA5P22460 613 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 GJA9P57773 515 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 GALNT2Q10471 571 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 LAMC2Q13753 1193 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 SQLEQ14534 574 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 PITRM1Q5JRX3 1037 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 ESRP1Q6NXG1 681 aaKnown RBP18.62■□□□□ 0.57
HPS3-204ENST00000462030 PIWIL4Q7Z3Z4 852 aaKnown RBP18.62■□□□□ 0.57
HPS3-204ENST00000462030 OR9I1Q8NGQ6 314 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 ELMO2Q96JJ3 720 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 MAML3Q96JK9 1138 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 CAMKK2Q96RR4 588 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 RANBP9Q96S59 729 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 UHRF1Q96T88 793 aaPredicted RBP18.62■□□□□ 0.57
HPS3-204ENST00000462030 ANKRD60Q9BZ19 345 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 SLC2A6Q9UGQ3 507 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 UBDO15205 165 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 ZSCAN9O15535 394 aaPredicted RBP18.62■□□□□ 0.57
HPS3-204ENST00000462030 NPR3P17342 541 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 ARNTP27540 789 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 TKTL1P51854 596 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 PRAMEP78395 509 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 NHSL2Q5HYW2 709 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 SLC27A1Q6PCB7 646 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 ZBTB49Q6ZSB9 765 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 PAQR9Q6ZVX9 377 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 MRPL40Q9NQ50 206 aaKnown RBP18.62■□□□□ 0.57
HPS3-204ENST00000462030 RAD54BQ9Y620 910 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 SQORQ9Y6N5 450 aa18.62■□□□□ 0.57
HPS3-204ENST00000462030 YJEFN3A6XGL0 299 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms