RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 AKAP14Q86UN6 197 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 PSTKQ8IV42 348 aaKnown RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 TMEM86AQ8N2M4 240 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 ITCHQ96J02 903 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 POP1Q99575 1024 aaKnown RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 SENP6Q9GZR1 1112 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 KCNN2Q9H2S1 579 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 ZDHHC6Q9H6R6 413 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 RNPEPL1Q9HAU8 725 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 PXMP2Q9NR77 195 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 ABCC13Q9NSE7 274 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 SNTG2Q9NY99 539 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 MAT2BQ9NZL9 334 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 SLC12A4Q9UP95 1085 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 TNFSF13BQ9Y275 285 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 DUSP10Q9Y6W6 482 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 AVILO75366 819 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 COX4I1P13073 169 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 TTPAP49638 278 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 SNRPD1P62314 119 aaKnown RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 ZNF844Q08AG5 666 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 PFKFB4Q16877 469 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 PERM1Q5SV97 790 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 SV2AQ7L0J3 742 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 FBXO33Q7Z6M2 555 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 FAM98AQ8NCA5 519 aaKnown RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 ZNF398Q8TD17 642 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 OMDQ99983 421 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 ALG9Q9H6U8 611 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 PXDNLA1KZ92 1463 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 GAKO14976 1311 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 ATXN2Q99700 1313 aaKnown RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 WRBO00258 174 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 CHST10O43529 356 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 NDUFS2O75306 463 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 CCNDBP1O95273 360 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 CST1P01037 141 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 DPYSL3Q14195 570 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 KCNA10Q16322 511 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 PABPC1LQ4VXU2 614 aaKnown RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 ZCCHC23Q6ZST2 131 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 FBXO16Q8IX29 292 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 PEX5LQ8IYB4 626 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 PIWIL2Q8TC59 973 aaKnown RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 ZNF606Q8WXB4 792 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 RFT1Q96AA3 541 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 TCF12Q99081 682 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 C2orf49Q9BVC5 232 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-205ENST00000461221 LRMDAQ9H2I8 198 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 C8orf4Q9NR00 106 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 ETNK2Q9NVF9 386 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 KBTBD4Q9NVX7 518 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 DKK3Q9UBP4 350 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 FAM50BQ9Y247 325 aa9.07□□□□□ -0.96
BRCA1-205ENST00000461221 A0A0G2JLW4 131 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 C1QTNF3-AMACRE9PGA6 284 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 FSBPO95073 299 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 NTRK1P04629 796 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 CAP2P40123 477 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 PLK1P53350 603 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 TNFAIP8L3Q5GJ75 292 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 KCNT2Q6UVM3 1135 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 MSANTD1Q6ZTZ1 278 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 CHST15Q7LFX5 561 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-205ENST00000461221 DHDDSQ86SQ9 333 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 DEFB106AQ8N104 65 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 PTGR2Q8N8N7 351 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-205ENST00000461221 GMCL1P1Q8NEA9 526 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 CNPPD1Q9BV87 410 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 TRMT13Q9NUP7 481 aaKnown RBP9.06□□□□□ -0.96
BRCA1-205ENST00000461221 PSMD13Q9UNM6 376 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 MED14O60244 1454 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 RGSL1A5PLK6 1076 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 ARP10275 920 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 ELF3P78545 371 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-205ENST00000461221 XIAPP98170 497 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 IL18R1Q13478 541 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 FAM171A1Q5VUB5 890 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 GCNT7Q6ZNI0 430 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 TTC7BQ86TV6 843 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 ZNF410Q86VK4 478 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 KATNAL2Q8IYT4 538 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 ZNF34Q8IZ26 560 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 PTCD2Q8WV60 388 aaKnown RBP9.06□□□□□ -0.96
BRCA1-205ENST00000461221 KLHL32Q96NJ5 620 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 GDF3Q9NR23 364 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 C2CD2Q9Y426 696 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 PLIN3O60664 434 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 SH3BGRLO75368 114 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 ULK1O75385 1050 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 GATBO75879 557 aaKnown RBP9.06□□□□□ -0.96
BRCA1-205ENST00000461221 OTCP00480 354 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 CD44P16070 742 aaKnown RBP9.06□□□□□ -0.96
BRCA1-205ENST00000461221 MARSP56192 900 aaKnown RBP9.06□□□□□ -0.96
BRCA1-205ENST00000461221 PPP4CP60510 307 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 CREMQ03060 361 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 PIK3R6Q5UE93 754 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 RNF43Q68DV7 783 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 TMPRSS11AQ6ZMR5 421 aa9.06□□□□□ -0.96
BRCA1-205ENST00000461221 ARCQ7LC44 396 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms