RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 CCDC163A0A0D9SF12 145 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 TTC34A8MYJ7 566 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 PRR33A8MZF0 331 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 PAPSS2O95340 614 aaPredicted RBP11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 IL1BP01584 269 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 PTPN3P26045 913 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 OXTRP30559 389 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 CCNHP51946 323 aaPredicted RBP11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 DR1Q01658 176 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 MPP3Q13368 585 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 CYTH1Q15438 398 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 GLE1Q53GS7 698 aaKnown RBP11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 ANKRD20A2Q5SQ80 823 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 ANKRD20A1Q5TYW2 823 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 EMC10Q5UCC4 262 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 ANKRD20A3Q5VUR7 823 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 ALG1LQ6GMV1 187 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 BRAT1Q6PJG6 821 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 GDPD4Q6W3E5 623 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 ARHGAP36Q6ZRI8 547 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 ZNF572Q7Z3I7 529 aaPredicted RBP11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 LINC00523Q86TU6 105 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 TSEN2Q8NCE0 465 aaKnown RBP11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 OR2A12Q8NGT7 310 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 ATG4AQ8WYN0 398 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 PTPRN2Q92932 1015 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 SLCO2A1Q92959 643 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 RAB7BQ96AH8 199 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 SIPA1Q96FS4 1042 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 FCRL5Q96RD9 977 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 SEMA3CQ99985 751 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 FSD1LQ9BXM9 530 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 TM6SF2Q9BZW4 377 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 RAB17Q9H0T7 212 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 IRF2BPLQ9H1B7 796 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 RSPH9Q9H1X1 276 aaPredicted RBP11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 GBA3Q9H227 469 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 GLOD4Q9HC38 313 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 PCDH9Q9HC56 1237 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 PRSS16Q9NQE7 514 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 RBM12Q9NTZ6 932 aaKnown RBP11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 FAM153AQ9UHL3 310 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 ATP8A1Q9Y2Q0 1164 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 UTP11Q9Y3A2 253 aaKnown RBP11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 MRFAP1Q9Y605 127 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 COL6A3P12111 3177 aa11.16□□□□□ -0.62
SMNDC1-203ENST00000460483 PRUNE2Q8WUY3 3088 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 SPTBN5Q9NRC6 3674 aaKnown RBP11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 TCRBV7S2A1N4TA0A589 114 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 TCRBV21S2A2A0A5A6 115 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 FAM187AA6NFU0 413 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 K7ERQ8 282 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 SLC7A4O43246 635 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 SMAD6O43541 496 aaKnown RBP11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 GPR37L1O60883 481 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 SIN3BO75182 1162 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 PEX11BO96011 259 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 EPOP01588 193 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 DCNP07585 359 aaKnown RBP11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 COL9A1P20849 921 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 PRKCHP24723 683 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 HOXA6P31267 233 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 EPHB1P54762 984 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 CDK16Q00536 496 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 WASHC5Q12768 1159 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 LAMB3Q13751 1172 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 SIX1Q15475 284 aaPredicted RBP11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 ZNF805Q5CZA5 627 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 TMEM31Q5JXX7 168 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 C9orf64Q5T6V5 341 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 ARMC12Q5T9G4 340 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 NAIF1Q69YI7 327 aaPredicted RBP11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 ERAP2Q6P179 960 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 LEKR1Q6ZMV7 388 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 DPY19L3Q6ZPD9 716 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 USP30Q70CQ3 517 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 TMPRSS6Q8IU80 811 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 GANCQ8TET4 914 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 MYO19Q96H55 970 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 SPACA7Q96KW9 195 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 OMDQ99983 421 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 TNKS2Q9H2K2 1166 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 ZDHHC6Q9H6R6 413 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 USP29Q9HBJ7 922 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 DKK3Q9UBP4 350 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 FBXO4Q9UKT5 387 aa11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 R3HDM2Q9Y2K5 976 aaKnown RBP11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 MTF2Q9Y483 593 aaPredicted RBP11.15□□□□□ -0.62
SMNDC1-203ENST00000460483 DOCK6Q96HP0 2047 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 SHISA7A6NL88 538 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 KPNA3O00505 521 aaPredicted RBP11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 CD160O95971 181 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 KRT14P02533 472 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 HLA-EP13747 358 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 ADCY8P40145 1251 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 WASP42768 502 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 SATB1Q01826 763 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 ELP6Q0PNE2 266 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 MESP2Q0VG99 397 aa11.14□□□□□ -0.63
SMNDC1-203ENST00000460483 MTAPQ13126 283 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms