RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ITM2BQ9Y287 266 aa12.99□□□□□ -0.33
COL18A1-206ENST00000459895 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 TSPAN11A1L157 253 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 GOLGA6L9A6NEM1 432 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 FANCGO15287 622 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 PLRG1O43660 514 aaKnown RBP12.98□□□□□ -0.33
COL18A1-206ENST00000459895 KIF5CO60282 957 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 TJP3O95049 919 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 SEMA4FO95754 770 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 ADRB3P13945 408 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 CXCR5P32302 372 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 HSPA9P38646 679 aaKnown RBP12.98□□□□□ -0.33
COL18A1-206ENST00000459895 CETN2P41208 172 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 PTGER3P43115 390 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 NEK3P51956 506 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 TAS2R38P59533 333 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 PPP2CBP62714 309 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 PPP2CAP67775 309 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 ZNF33AQ06730 810 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 TRAF2Q12933 501 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 BYSLQ13895 437 aaKnown RBP12.98□□□□□ -0.33
COL18A1-206ENST00000459895 HNRNPDQ14103 355 aaKnown RBP12.98□□□□□ -0.33
COL18A1-206ENST00000459895 ELF2Q15723 593 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 SLC45A4Q5BKX6 768 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 GDPD4Q6W3E5 623 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 SRLQ86TD4 932 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 C11orf74Q86VG3 221 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 SLC41A1Q8IVJ1 513 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 CDKL3Q8IVW4 592 aaPredicted RBP12.98□□□□□ -0.33
COL18A1-206ENST00000459895 TMEFF1Q8IYR6 380 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 BBS5Q8N3I7 341 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.98□□□□□ -0.33
COL18A1-206ENST00000459895 DEFB119Q8N690 84 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 CNTD1Q8N815 330 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 TFB1MQ8WVM0 346 aaKnown RBP12.98□□□□□ -0.33
COL18A1-206ENST00000459895 ATG4AQ8WYN0 398 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 HSPA12BQ96MM6 686 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 KLHL32Q96NJ5 620 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 NUDCD1Q96RS6 583 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 IL12RB2Q99665 862 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 GPR174Q9BXC1 333 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 OSBPL1AQ9BXW6 950 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 POLR1EQ9GZS1 481 aaKnown RBP12.98□□□□□ -0.33
COL18A1-206ENST00000459895 BTBD1Q9H0C5 482 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 NEUROG2Q9H2A3 272 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 C6orf106Q9H6K1 298 aaPredicted RBP12.98□□□□□ -0.33
COL18A1-206ENST00000459895 C10orf88Q9H8K7 445 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 DYRK4Q9NR20 520 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 GGT7Q9UJ14 662 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 ARIH1Q9Y4X5 557 aaPredicted RBP12.98□□□□□ -0.33
COL18A1-206ENST00000459895 PCDH15Q96QU1 1955 aa12.98□□□□□ -0.33
COL18A1-206ENST00000459895 PRR23AA6NEV1 266 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 MEI4A8MW99 385 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 PROB1E7EW31 1015 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 EPN2O95208 641 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 POP4O95707 220 aaKnown RBP12.97□□□□□ -0.33
COL18A1-206ENST00000459895 PTPN3P26045 913 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 SERPINA4P29622 427 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 OXTRP30559 389 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 CSNK1DP48730 415 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 SCNN1BP51168 640 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 RENBPP51606 427 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 EIF3EP60228 445 aaKnown RBP12.97□□□□□ -0.33
COL18A1-206ENST00000459895 WASHC5Q12768 1159 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 IHHQ14623 411 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 ZNF805Q5CZA5 627 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 NCEH1Q6PIU2 408 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.97□□□□□ -0.33
COL18A1-206ENST00000459895 SLC36A4Q6YBV0 504 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 ERN2Q76MJ5 926 aaKnown RBP12.97□□□□□ -0.33
COL18A1-206ENST00000459895 ADAT2Q7Z6V5 191 aaKnown RBP12.97□□□□□ -0.33
COL18A1-206ENST00000459895 SLC13A5Q86YT5 568 aaPredicted RBP12.97□□□□□ -0.33
COL18A1-206ENST00000459895 CAMK1DQ8IU85 385 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 LRIG1Q96JA1 1093 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 ZC3H10Q96K80 434 aaKnown RBP12.97□□□□□ -0.33
COL18A1-206ENST00000459895 TUBGCP5Q96RT8 1024 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 WDR24Q96S15 920 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 SEMA3CQ99985 751 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 HDAC8Q9BY41 377 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 BRD8Q9H0E9 1235 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 ATP13A3Q9H7F0 1226 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 NOD2Q9HC29 1040 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 SCUBE2Q9NQ36 999 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 RBM22Q9NW64 420 aaKnown RBP eCLIP12.97□□□□□ -0.337e-12■■■■□ 24.3
COL18A1-206ENST00000459895 NCKAP1Q9Y2A7 1128 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 JRKLQ9Y4A0 524 aa12.97□□□□□ -0.33
COL18A1-206ENST00000459895 FAM47DPA6NHR8 397 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 C16orf96A6NNT2 1141 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 HACD1B0YJ81 288 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 C10orf142B7Z368 130 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 F5H423 210 aaPredicted RBP12.96□□□□□ -0.33
COL18A1-206ENST00000459895 H7C0C1 242 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 SLC7A4O43246 635 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 MAP3K13O43283 966 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 NDUFS2O75306 463 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 NEBLO76041 1014 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 CPP00450 1065 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 JCHAINP01591 159 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 RBL1P28749 1068 aa12.96□□□□□ -0.33
COL18A1-206ENST00000459895 MAPK8P45983 427 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms