RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 TBATAQ96M53 351 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 ZNF641Q96N77 438 aaPredicted RBP10.16□□□□□ -0.78
HDLBP-228ENST00000459788 TUBGCP5Q96RT8 1024 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 C1QTNF7Q9BXJ2 289 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 RAB6CQ9H0N0 254 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 ZDHHC6Q9H6R6 413 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 LRRC19Q9H756 370 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 EVA1BQ9NVM1 165 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 NCKIPSDQ9NZQ3 722 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 LCMT1Q9UIC8 334 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 ZMIZ1Q9ULJ6 1067 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 ZFR2Q9UPR6 939 aaKnown RBP10.16□□□□□ -0.78
HDLBP-228ENST00000459788 FREM2Q5SZK8 3169 aa10.16□□□□□ -0.78
HDLBP-228ENST00000459788 ASXL3Q9C0F0 2248 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 CFAP47Q6ZTR5 3102 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 TSPAN11A1L157 253 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 KCNK3O14649 394 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 FPGTO14772 594 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 SLC31A1O15431 190 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 CREB3O43889 395 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 PRPSAP2O60256 369 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 PRAMEF11O60813 436 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 RFPL3O75679 317 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 TMCC1O94876 653 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 TPM3P06753 285 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 ALPPL2P10696 532 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 CKMT2P17540 419 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 SPINK2P20155 84 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 ACP1P24666 158 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 HNF1BP35680 557 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 PBX1P40424 430 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 HNRNPKP61978 463 aaKnown RBP eCLIP10.15□□□□□ -0.78
HDLBP-228ENST00000459788 YPEL5P62699 121 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 ZBED6P86452 979 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 E2F1Q01094 437 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 NSUN2Q08J23 767 aaKnown RBP eCLIP10.15□□□□□ -0.78
HDLBP-228ENST00000459788 SGCGQ13326 291 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 AGERQ15109 404 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 SKOR2Q2VWA4 1001 aaPredicted RBP10.15□□□□□ -0.78
HDLBP-228ENST00000459788 POM121L1PQ3SYA9 428 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 BOLA3Q53S33 107 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 AFMIDQ63HM1 303 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 PARS2Q7L3T8 475 aaKnown RBP10.15□□□□□ -0.78
HDLBP-228ENST00000459788 DNAAF5Q86Y56 855 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 PDCD7Q8N8D1 485 aaKnown RBP10.15□□□□□ -0.78
HDLBP-228ENST00000459788 RFFLQ8WZ73 363 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 SPOCK2Q92563 424 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 VOPP1Q96AW1 172 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 CNDP2Q96KP4 475 aaKnown RBP10.15□□□□□ -0.78
HDLBP-228ENST00000459788 NAP1L5Q96NT1 182 aaPredicted RBP10.15□□□□□ -0.78
HDLBP-228ENST00000459788 DUSP23Q9BVJ7 150 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 TAS2R14Q9NYV8 317 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 UBA2Q9UBT2 640 aaPredicted RBP10.15□□□□□ -0.78
HDLBP-228ENST00000459788 CNOT8Q9UFF9 292 aaKnown RBP10.15□□□□□ -0.78
HDLBP-228ENST00000459788 AP4E1Q9UPM8 1137 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 CSNK1G3Q9Y6M4 447 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 ZFYVE26Q68DK2 2539 aa10.15□□□□□ -0.78
HDLBP-228ENST00000459788 LRP4O75096 1905 aa10.15□□□□□ -0.79
HDLBP-228ENST00000459788 ADAMTS20P59510 1910 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 SPTY2D1-AS1A0A0U1RR47 76 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 A0A1W2PQ67 120 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 TMEM110-MUSTN1A8MSY1 372 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 GOLGA6L19H0YKK7 550 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 H3BM21 787 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 EEF2KO00418 725 aaKnown RBP10.14□□□□□ -0.79
HDLBP-228ENST00000459788 KRIT1O00522 736 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 DDX3XO00571 662 aaKnown RBP eCLIP10.14□□□□□ -0.79
HDLBP-228ENST00000459788 HSPA9P38646 679 aaKnown RBP10.14□□□□□ -0.79
HDLBP-228ENST00000459788 ACADVLP49748 655 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 NUMBP49757 651 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 RENBPP51606 427 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 RHOAP61586 193 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 FANCCQ00597 558 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 OGDHQ02218 1023 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 PTK2BQ14289 1009 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 PIGHQ14442 188 aaPredicted RBP10.14□□□□□ -0.79
HDLBP-228ENST00000459788 PROX2Q3B8N5 592 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 TMEM52BQ4KMG9 183 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 BRAT1Q6PJG6 821 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 GCNT7Q6ZNI0 430 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 PROSER1Q86XN7 944 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 GATAD2AQ86YP4 633 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 LRRC49Q8IUZ0 686 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 PYROXD2Q8N2H3 581 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 SDR16C5Q8N3Y7 309 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 RYBPQ8N488 228 aaPredicted RBP10.14□□□□□ -0.79
HDLBP-228ENST00000459788 NIPA2Q8N8Q9 360 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 PNPLA1Q8N8W4 532 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 FAM181AQ8N9Y4 354 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 OR4C6Q8NH72 309 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 BTN2A2Q8WVV5 523 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 TEKT4Q8WW24 435 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 HMCESQ96FZ2 354 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 ZNF599Q96NL3 588 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 KLF6Q99612 283 aaPredicted RBP10.14□□□□□ -0.79
HDLBP-228ENST00000459788 TM6SF2Q9BZW4 377 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 CCDC86Q9H6F5 360 aaKnown RBP10.14□□□□□ -0.79
HDLBP-228ENST00000459788 ZWILCHQ9H900 591 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 PDFQ9HBH1 243 aa10.14□□□□□ -0.79
HDLBP-228ENST00000459788 CBX8Q9HC52 389 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms