RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 RAD9BQ6WBX8 426 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 ADAT2Q7Z6V5 191 aaKnown RBP16.37■□□□□ 0.21
CD28-203ENST00000458610 SRLQ86TD4 932 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 CPNE8Q86YQ8 564 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 OR6K2Q8NGY2 324 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 C1orf216Q8TAB5 229 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 RAPGEF5Q92565 580 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 KLHL32Q96NJ5 620 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 PSKH2Q96QS6 385 aa16.37■□□□□ 0.21
CD28-203ENST00000458610 GTPBP2Q9BX10 602 aaKnown RBP16.37■□□□□ 0.21
CD28-203ENST00000458610 C4orf47A7E2U8 309 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 NEMP1O14524 444 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 PJA2O43164 708 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 NRDCO43847 1150 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 MAFKO60675 156 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 MAGEC1O60732 1142 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 TNNT1P13805 278 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 C21orf59P57076 290 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 RPS21P63220 83 aaKnown RBP16.36■□□□□ 0.21
CD28-203ENST00000458610 RALGPS1Q5JS13 557 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 NCBP2-AS2Q69YL0 99 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 KIAA1161Q6NSJ0 714 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 BZW1Q7L1Q6 419 aaKnown RBP16.36■□□□□ 0.21
CD28-203ENST00000458610 DAAM2Q86T65 1068 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 TTC7BQ86TV6 843 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 HORMAD1Q86X24 394 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
CD28-203ENST00000458610 PAF1Q8N7H5 531 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 RMDN1Q96DB5 314 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 SERAC1Q96JX3 654 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 SUV39H2Q9H5I1 410 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 ATP13A3Q9H7F0 1226 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 TM9SF3Q9HD45 589 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 AASDHPPTQ9NRN7 309 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 KLHL11Q9NVR0 708 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 CHD5Q8TDI0 1954 aa16.36■□□□□ 0.21
CD28-203ENST00000458610 NUP205Q92621 2012 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.35■□□□□ 0.21
CD28-203ENST00000458610 A0A1W2PQ67 120 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 A0A1W2PQU0 124 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 C10orf142B7Z368 130 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 PRAMEF26H0Y7S4 382 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 APOL1O14791 398 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 DFNA5O60443 496 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 OPHN1O60890 802 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 NEBLO76041 1014 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 ZRANB2O95218 330 aaKnown RBP eCLIP16.35■□□□□ 0.21
CD28-203ENST00000458610 CES1P23141 567 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 CCNCP24863 283 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 SERPINA4P29622 427 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 GKP32189 559 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 GARSP41250 739 aaKnown RBP16.35■□□□□ 0.21
CD28-203ENST00000458610 CSNK1EP49674 416 aaKnown RBP16.35■□□□□ 0.21
CD28-203ENST00000458610 TAS2R38P59533 333 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 AP1S1P61966 158 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 POLR2LP62875 67 aaKnown RBP16.35■□□□□ 0.21
CD28-203ENST00000458610 BCL2L1Q07817 233 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 SLC10A7Q0GE19 358 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 GALNT2Q10471 571 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 OVGP1Q12889 678 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 HNRNPDQ14103 355 aaKnown RBP16.35■□□□□ 0.21
CD28-203ENST00000458610 TFDP2Q14188 446 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 STAT4Q14765 748 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 NAPEPLDQ6IQ20 393 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 BRAT1Q6PJG6 821 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 ARHGAP36Q6ZRI8 547 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 PARS2Q7L3T8 475 aaKnown RBP16.35■□□□□ 0.21
CD28-203ENST00000458610 RCOR2Q8IZ40 523 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 TSEN2Q8NCE0 465 aaKnown RBP16.35■□□□□ 0.21
CD28-203ENST00000458610 CCDC112Q8NEF3 446 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 TPCN2Q8NHX9 752 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 FAM174AQ8TBP5 190 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 KIAA1524Q8TCG1 905 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 FATE1Q969F0 183 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 TSGA13Q96PP4 275 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 RXFP3Q9NSD7 469 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 AMACRQ9UHK6 382 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 FADS3Q9Y5Q0 445 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 GON4LQ3T8J9 2241 aa16.35■□□□□ 0.21
CD28-203ENST00000458610 CDX4O14627 284 aaPredicted RBP16.34■□□□□ 0.21
CD28-203ENST00000458610 VILLO15195 856 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 MATN3O15232 486 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 CER1O95813 267 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 NFKBIAP25963 317 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 CD38P28907 300 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 CETN2P41208 172 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 MMP13P45452 471 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 SCNN1BP51168 640 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 ELP6Q0PNE2 266 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 SGCGQ13326 291 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 SLC14A1Q13336 389 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 RFX6Q8HWS3 928 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 TMEM139Q8IV31 216 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 TP53INP2Q8IXH6 220 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 SYCE1Q8N0S2 351 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 PQLC3Q8N755 202 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 NETO2Q8NC67 525 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 UBE2Q2Q8WVN8 375 aa16.34■□□□□ 0.21
CD28-203ENST00000458610 RNF25Q96BH1 459 aaPredicted RBP16.34■□□□□ 0.21
CD28-203ENST00000458610 RBM41Q96IZ5 413 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms